Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03548 TGAAACTGTCATTTCTCAATCATTAACTATGAAAATGACAAGCATGCGTGTCTCCTTCCTAAACCATACTCTTATTTCCTATTAATTTGGTCTTTCTCCTCGGAGGCTGTCCCCTTCAGTGCTTCAACCTTCAGCTATGCTGCAGCTACCTCCAAATTCACTTCAGTATTATTCTACTTGTGTTTGTCGGTGAAGGATCTTCATAATGGAATTTCAGCTTATTTTCCTGTTAATTAAGCTACATTTCGTTATGTGTACACCTCAGCTTCATGAATATGCTGCCACCTATTTGCATCATACTAGAATCAGAAGCCCTTCAAGTATTGCTTTTCCACCATCAGAGTCACCTTCTGGAGTTCCTGATAGTATTGCACTTCCTCCGTCCAAGACATCTTCTAGAATTCCCCGAATGAAATGGAAGCACAGTTCTATGAATTCTCCAATATCACACCATAAGTATCACCATTCCAGCAACCGAGTTCTTGGGCCAATCCACCCTCATACTCATCAAGGTTATCCAGTCTTCAGATCACAACATCCATTCTCATCACCTATGAGTTGGGATTTAATTGCACCCGCACCAGCACCTGATCCATCACTACCAATTCTAACACATCCCTTGAATGTTCCCTCTCCTTCCCCTAGAATCTCACCTCCAAGTTCATCATTGAAGAAGACAAAGACTCCACCACCACCATATGCTTTGGTTCTACCATCTCCACCACTGAACCAAGATTGTATGTTGGTAACTTGCTCTGAACCCTTGACATATACACCTCCTGGATCACCTTGTGGTTGTGTATGGCCAATTCAAGCTAAACTTCGCATCAGCATTGCAATATACAAGTTTTTTCCTTTGATTTCCAAGCTGACCACAGAAATTGCAACTAGTGTTTTGTTGAACCAAAATCAAGTACGCATTGTAGGAGCTGGTGCAACTAGCCAGCCGCTCCAGAAAACCAATGTTATCATAAACTTGGTACCTCAAGGAGTGAAGTTTGATGATACAACAACATTTTTAATATATAAGAAATTCTGGCAGAGGGAGATTCTCAATAGTGCTTCTGCCTTTGGTGCTTATGAAGTGCTCTATGTTCATTATCCAGGCCTTCCACCATCTCCACCTTCAAATGTTTATGGTATAGATGTTGAACCATACTCTGGTCGTGGCAACAATGGAGCAATAGTGAAACCTTTAGGAGTAGATGTTTCAAGGAAGAAAAAAAAAGAGAGTGGTGAAAGAATGGTTACAATGATCGTGCTTTCATCTTTTACTGCGTTTGTTCTATTCATTGGACTTGCGTGGCTTTGTCTCCTGAAATGTGGTTCTTGCACTCTTGAACCAGAACAAATTCCAGAGGTCAAAATTCCATCCTCTTCAAACCGATCAGGGACTGCCAGTGCTAAGTCATTGATTTATGGGAGCATGCCGGGTTCTACATCAATGTCTTTCAATTCTGGAAAAATGATATACACTGGATCAGCTAAAACATTTACTTTGAATGAAATAGAAAAAGCAACAAATAACTTCAATTCTGCAAGCATATTAGGAGAAGGTGGCTTCGGTCTTGTTTATAAAGGTCTCCTACATGACGGCAGGGATGTGGCAGTGAAGATTATGAAACCAGATGACAATCATGGTTACCGTGAATACTTAGCAGAAGCTGAGGTGCTTAGCAGCTTGCACCATAGAAATTTAGTTAAATTGATAGGTATATGCACAGAGAAACAGACTCGTTGCTTAGTTTATGAGCTTGTTCCTAATGGCAGTGTTGAATCTCACTTACATGGTTTTGACAAGGAAACCGAACCACTTGATTGGGACGCCCGGATGAAGATTGCAGTTGGTGCAGCTAGGGGATTGGCTTATCTGCATGAAGATTGTAATCCATGTGTCATACATAGGGACTTCAAATCCAGCAACATCTTATTAGAATATGATTTTACACCCAAAGTTTCAGATTTTGGATTGGCTAGAACAACACTAAACGAGGGAAACAAGCACATCTCAACACAAGTTATTGGAACATTTGGCTACGTGGCTCCTGAATATGCAATGACTGGCCATCTTCTTGTCAAAAGTGATGTGTACAGCTATGGAGTAGTACTGCTTGAGCTCCTAACTGGAAGAAAGCCTGTGGATTTCGCACAGCCACCAGGTCAAGAAAACCTTGTTGCTTTGGCTCGTCCACTTCTTACAAATAAGGAGGGTTTGCAGAAAATCATAGACCCAGATATCAAGCTTAGTGTTACTGTTGATACCATGGTAAAAGTTGCAGCAATTGCATCCATGTGTGTGCAACCAGAAGTCACTCAACGTCCTTTCATGGGTGAAGTTGTTCAGGCCTTGAAGCTGGTATGTAGTGACTTTGAGGAAACAAGTGTGTAAGACCAAAATGTTTTCGAGAAGAATGTCTTGTAAGTTGTAAATAAACCCAGCCTACTGATGTTTTCCAGCGTTCCAGGTGAGAGAGTGGACTTTTCAGAGTTTAAATAAAACCACCCTCAGACTGGTTATCAACCTACGTAACAAGTGAGAACCGAGGTAGCATTATACTCATAAGAGATGTAAGGAATTTGAGTCGTTTAGGTCGTTTGCTTAGAGGGACCATGAATTTTCAACTAAACTGTGTGCAGGTAGGGAGCCTGCGTTTACATTTTGGCAAATGATATTCACATACCCCTTTTTTATATTCACTCTTCAAGTCCAGAGACATATTACCATCATGTCTTAGCCTCTCTACTCATATGTCAAATTTTAAGTACACAAACCAATTCTTATGTCAAGTCAGATGCCTATTTGAATTTGAAATTTACTTACATTGAGGTAATATGCACAGAGAAATAGACTTGCTGCTTGG 2861 0.4069 MEFQLIFLLIKLHFVMCTPQLHEYAATYLHHTRIRSPSSIAFPPSESPSGVPDSIALPPSKTSSRIPRMKWKHSSMNSPISHHKYHHSSNRVLGPIHPHTHQGYPVFRSQHPFSSPMSWDLIAPAPAPDPSLPILTHPLNVPSPSPRISPPSSSLKKTKTPPPPYALVLPSPPLNQDCMLVTCSEPLTYTPPGSPCGCVWPIQAKLRISIAIYKFFPLISKLTTEIATSVLLNQNQVRIVGAGATSQPLQKTNVIINLVPQGVKFDDTTTFLIYKKFWQREILNSASAFGAYEVLYVHYPGLPPSPPSNVYGIDVEPYSGRGNNGAIVKPLGVDVSRKKKKESGERMVTMIVLSSFTAFVLFIGLAWLCLLKCGSCTLEPEQIPEVKIPSSSNRSGTASAKSLIYGSMPGSTSMSFNSGKMIYTGSAKTFTLNEIEKATNNFNSASILGEGGFGLVYKGLLHDGRDVAVKIMKPDDNHGYREYLAEAEVLSSLHHRNLVKLIGICTEKQTRCLVYELVPNGSVESHLHGFDKETEPLDWDARMKIAVGAARGLAYLHEDCNPCVIHRDFKSSNILLEYDFTPKVSDFGLARTTLNEGNKHISTQVIGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDFAQPPGQENLVALARPLLTNKEGLQKIIDPDIKLSVTVDTMVKVAAIASMCVQPEVTQRPFMGEVVQALKLVCSDFEETSV 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03548 727 ProSiteProfiles Protein kinase domain profile. 442 718 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03548 727 ProSitePatterns Serine/Threonine protein kinases active-site signature. 564 576 IPR008271 GO:0004672|GO:0006468
Pste3g03548 727 FunFam Receptor-like serine/threonine-protein kinase ALE2 518 727 - -
Pste3g03548 727 Gene3D Transferase(Phosphotransferase) domain 1 518 726 - -
Pste3g03548 727 Pfam Protein tyrosine and serine/threonine kinase 446 715 IPR001245 GO:0004672|GO:0006468
Pste3g03548 727 PANTHER OS01G0750732 PROTEIN 170 722 - -
Pste3g03548 727 ProSitePatterns Protein kinases ATP-binding region signature. 448 470 IPR017441 GO:0005524
Pste3g03548 727 Gene3D Phosphorylase Kinase; domain 1 413 517 - -
Pste3g03548 727 SUPERFAMILY Protein kinase-like (PK-like) 421 715 IPR011009 -
Pste3g03548 727 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 417 517 - -
Pste3g03548 727 MobiDBLite consensus disorder prediction 136 162 - -
Pste3g03548 727 CDD STKc_IRAK 448 716 - -
Pste3g03548 727 MobiDBLite consensus disorder prediction 40 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03548 Pste-Chr3 27886721 27891758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03548 175 724 Receptor kinase-like Gene Family AT5G56890 61.151 0.0 657
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Pste3g03548 PK_Tyr_Ser-Thr 5.3e-48 CL0016