Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03530 CCTCATTTCACCTCGCTCGGTTTCTGTTTCTTTTCTTCGACTCCAATGGGTGCTTCGGGAAAGTGGTTTAAGTCACTTCTTCCTTTTCGAAAGACTTCAACTTCAACTTCAACCACCGATCAAAACGGAGTAATGTGTAATAAGGAGAAGGGTGGTGACAACAAGAGTAAGAAGAAGTGGAAGCTATGGAGGGCTTCTTCAGAAGGGTCTGTGAAGAAAATTGGGGATGCTTCTGTACCTGATTCTTCCCTTACTTACGCTGTGGCTGTCATGGTTAACAAAGATTTCAAGCTTATCAAGCAGGAATGGGCTGCCATCCGCATTCAGGCTGTGTTTCGAGCCTTCTTGGCTAGACGGGCTTTGAGGGCCCTGAGGGCTGTGGTAAGGCTACAAGCTATTTTTCGCGGCAGGCTAGTAAGAAAGCAAGCAGCTGTTACTCTAAGGTGTATGCAGGCTCTTGTTCGAGTTCAGGCGCGTGTGAGGGCAAGGTATGTGAGGAATTCCCCTGAAGGGAAAGCCGTGCAGAAATTACTAGATGAGCATCGCAACCAAGCTGATCCTTTTACTCAGATTGAGCAAAGATGGTGTGACATTCCTGGAACTCTGGATGAAGTTAAAGCAAAGATACGAATTAGGCAAGAAGGAGCCATCAAGAGGGATAGAGCAATGGCATACTCTCTATCCACACAGTCAAGAGTGAGTGCTAGTCCAAACTCAAAAGCCACCAAGGCATTGACTCCTCTCAAGCATAGCAACATAAGCAGTAAGAACTTAGGATATAGCTTGTTGGAACGCTGGATGGAGGCCAAGCCATGGGAGAGTCCAATCTCCAGGAAGAGTGAAGACCTTGTCCCTGCATTCCAACCAAGAAGGAATGGTATCACAACTAGGATTTCTGTCAAATCTCTTATAACTGGTCAATCTACTCCATCATCTTCGGCCATCAGCTCTGAATACATGTGTGATGACAGCCCTGTGTCAACATCTTATACATCTGGATCTCACTCTTTGCCATCCACCAATACTGTTTTGGTGGAAGCAACAGAGGAAAGAGATGTTCATCAACCAAGCTACATGAATTTGACAGAATCAACTAAAGCTAAACTGAAAGCTAGCGGGAGTTCTTCGCAGAATTCAAAGAGACTTGTAATGGAGGAGAGTGTGTCTCAAAGCACAACAACAGTATTTATGAATGGAGATGCGAGAAGCTGTTCTAATTCTAATCCTTCAGTTAACTTTTGGAAGGATTCCTGTGCAACGCCTCTAAGGGCAAGTTATCAAAAACGACAAATCAGGATATGAGTTTTTGTATCAATGAGTTCAACAGCTCGTTGTCCGTTTCATCTTAGACAGATTAAGATGAACATGCGTGTCCAAGTTAGGATAGAGGGTTAATTGGCACATATAGATAACATAGCGGTTTTGTTTTGTATGAAGAATGAAATAGCGAACTAGTATAGTACTTTAATCTGTATGGTGTTTTTTACACACTAATTTATATGCATAGTGGCTTTTTATCTATTCAACTTAATAAGCTACACTTTTTTATTGCACAGATCTTATGTTACACATCATATCATGAAAATTCCATTTGACTGATGTATGGTGATCTGTATATACAGCCG 1625 0.4246 MGASGKWFKSLLPFRKTSTSTSTTDQNGVMCNKEKGGDNKSKKKWKLWRASSEGSVKKIGDASVPDSSLTYAVAVMVNKDFKLIKQEWAAIRIQAVFRAFLARRALRALRAVVRLQAIFRGRLVRKQAAVTLRCMQALVRVQARVRARYVRNSPEGKAVQKLLDEHRNQADPFTQIEQRWCDIPGTLDEVKAKIRIRQEGAIKRDRAMAYSLSTQSRVSASPNSKATKALTPLKHSNISSKNLGYSLLERWMEAKPWESPISRKSEDLVPAFQPRRNGITTRISVKSLITGQSTPSSSAISSEYMCDDSPVSTSYTSGSHSLPSTNTVLVEATEERDVHQPSYMNLTESTKAKLKASGSSSQNSKRLVMEESVSQSTTTVFMNGDARSCSNSNPSVNFWKDSCATPLRASYQKRQIRI 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03530 418 ProSiteProfiles IQ motif profile. 110 137 IPR000048 GO:0005515
Pste3g03530 418 PANTHER IQ-DOMAIN 5-RELATED 1 381 - -
Pste3g03530 418 MobiDBLite consensus disorder prediction 17 42 - -
Pste3g03530 418 Pfam IQ calmodulin-binding motif 110 127 IPR000048 GO:0005515
Pste3g03530 418 Pfam IQ calmodulin-binding motif 88 107 IPR000048 GO:0005515
Pste3g03530 418 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 82 128 IPR027417 -
Pste3g03530 418 ProSiteProfiles IQ motif profile. 86 114 IPR000048 GO:0005515
Pste3g03530 418 Gene3D - 84 137 - -
Pste3g03530 418 SMART iq_5 85 107 IPR000048 GO:0005515
Pste3g03530 418 SMART iq_5 108 129 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03530 Pste-Chr3 27744769 27747073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03530 1 401 IQD Protein Family AT1G72670 41.648 2.35e-80 252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03530 3 27744769 27747073 Pste6g01064 6 4342820 4345583 PCT