Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03515 ATGTTTCTTGTTGACTGTTTTTGTTTGGCAGCTGGGATCCCAAATGTGAGATGGTTTGGTGTTGAAGGAGATTACAATGTGCTTGTGATGGATTTGCTGGGACCTAGTCTTGAGGATTTATTCAATTTCTGTAGCCGAAAATTGTCACTCAAAACTGTTCTCATGCTTGCTGATCAGATGGTGGGATGTCCTATAAATCGAGTTGAGTTTATTCATTCGAAATCATTTTTACATAGGGACATCAAGCCAGACAACTTCCTAATGGGTTTGGGGAGACGTGCAAATCAAGTATATGCCATTGACTTTGGTCTTGCTAAGAAATACAGAGACACCTCTACCCATCAACATATTCCTTACAGAGAAAATAAGAATTTGACTGGAACTGCCAGATACGCTAGTATGAATACTCATCTTGGAATTGAGCAAAGCCGTAGGGACGACTTAGAATCACTTGGATTTGTTCTTATGTATTTTTTGAGAGGAAGTCTCCCATGGCAGGGATTGAAAGCAGGTACTAAGAAGCAGAAGTATGAGAAAATCAGTGAGAAGAAAGTTTCTACTTCTATTGAGTCGCTGTGTCGTGGCTACCCTTCAGAGTTTGCTTCATACTTCCATTACTGTCGGTCACTGCGATTTGATGATAAGCCGGATTATGCTTATTTGAAAAGGCTTTTTCGTGACCTTTTCATTCGTGAAGGATTCCAATTTGATTATGTCTTTGATTGGACTATTTTAAAATATCAGCAATCTCAAATTGCCACACCTCCTGGTCGTGCCATTGGCCCTGCTGCTGGACCAAGTGGGGAGAACAGTAGGCATTGGTCCTCATCTGATCCTGCTCGAAGAAGAAACTCTGGACCTATTGCTAATGATAGAATCTTGCGAGGTGCTGTATCCAACAGTCGGGATGCAACGGTTGGCAATGAGACTGAGTCCTCTCATCCTCTCACCACCGTAGATGCTAGTTTTGGATCACTCTCTGCTGCTCAAAGAAGTTTTCCTATCACATCAAACATGAATAACTTTGAGTCTACCATCCGTGGTCTTGAGACCCTAAATTTCAGTGACGAAAGGTTACACTATTAG 1086 0.4171 MFLVDCFCLAAGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMVGCPINRVEFIHSKSFLHRDIKPDNFLMGLGRRANQVYAIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGFVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIESLCRGYPSEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQIATPPGRAIGPAAGPSGENSRHWSSSDPARRRNSGPIANDRILRGAVSNSRDATVGNETESSHPLTTVDASFGSLSAAQRSFPITSNMNNFESTIRGLETLNFSDERLHY 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03515 361 MobiDBLite consensus disorder prediction 299 318 - -
Pste3g03515 361 FunFam CK1 family protein kinase 3 261 - -
Pste3g03515 361 Pfam Protein kinase domain 24 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03515 361 PANTHER CASEIN KINASE-RELATED 13 290 - -
Pste3g03515 361 ProSiteProfiles Protein kinase domain profile. 1 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03515 361 SMART serkin_6 2 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03515 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 76 88 IPR008271 GO:0004672|GO:0006468
Pste3g03515 361 SUPERFAMILY Protein kinase-like (PK-like) 12 242 IPR011009 -
Pste3g03515 361 MobiDBLite consensus disorder prediction 301 318 - -
Pste3g03515 361 MobiDBLite consensus disorder prediction 256 294 - -
Pste3g03515 361 Gene3D Transferase(Phosphotransferase) domain 1 7 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03515 Pste-Chr3 27660692 27665677 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03515 48 234 MAP Kinase Kinase Kinase AT1G62400 27.368 1.20e-08 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Pste3g03515 Pkinase 3.9e-15 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03515 3 27660692 27665677 Pste6g01083 6 4461963 4466863 PCT