Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03506 GAAATGAATCATGAAAAGTTTAGAAAAGAAGAGGATGTAGAAAAAGTTTGGCTCATTGAAGATGCTACAATGACGTTGGTAGAGCCAGAAAGGCAAAAAGCCAAAACAACTATGGAGTCAACGGAAATATTAAAATGTCTAGTAGAAACAAAGAGCCAAAATGGAAAACAAACGACAATAAGAGTCATGCAGGAGGAAGAAGAGAAGACTGAAGCATTAAATGCAAATGCACATAATAAAATTATATTTAAAAGATATAATATTAAAGAAATTGAAGTTGCGACAAATTACTTTGACAATGCCCTCAAAATAGGTGAAGGTGGATATGGAGCTGTTTTTAAAGGGGTGCTTGATCACACTTATGTTGCAATCAAGGCCCTGAAACCAGACATATCACAAGGGGAAAGGCAATTTCAACAAGAGGTTAATGTTTTGAGTACAATAAAACATCCGAACATGGTTCAACTTTTAGGTGCTTGCCCAGAGTATGGAATCCTTGTATATGAATACATTGAAAATGGAAACTTAGAAGAGCGTCTCTACCAAAAAGATAGCACTCCAACAATTCCATGGAAAGTTCGATTCAGAATTACATCAGAAATTGCAACTGGACTACTTTTCCTTCACCAGACAAAGCCTGAGCCAGTTGTGCATCGTGATCTCAAGCCAGCAAACATTCTGTTGGACCACAATTATGTGAGCAAGATCACTGATGTGGGTTTGGCAAGGTTAGTTCCCCCTAGTGTAGCTAACAAAACTACTCAATACCACAAGACAACTGCAGCAGGTACATTTTGCTACATTGACCCAGAGTATCAACAAACAGGACTATTGGGTGTAAAATCAGACATATACTCCTTAGGTGTAATGTTGCTACAAATTATTACAGGAAAACCTCCTATGGGTGTGGCTCACCTAGTTCAAGAGGCTATAGATAATGATAAATTCCTAGAGGTGCTTGATCCAACTATCACTGATTGGCCCATTGAAGAGACTTTATCATATGCTAGGTTGGCTTTGAAGTGTTGTGAGATGAGAAAACGAGATAGACCAGACCTTGGTTCTATTATCTTGCCAGAACTAAATCGTCTTCAAAATCTTGGAGAAGTAGCCTCTAAGACACTTATTTTACCTACCAAACATGTTAATGACTAA 1155 0.3784 EMNHEKFRKEEDVEKVWLIEDATMTLVEPERQKAKTTMESTEILKCLVETKSQNGKQTTIRVMQEEEEKTEALNANAHNKIIFKRYNIKEIEVATNYFDNALKIGEGGYGAVFKGVLDHTYVAIKALKPDISQGERQFQQEVNVLSTIKHPNMVQLLGACPEYGILVYEYIENGNLEERLYQKDSTPTIPWKVRFRITSEIATGLLFLHQTKPEPVVHRDLKPANILLDHNYVSKITDVGLARLVPPSVANKTTQYHKTTAAGTFCYIDPEYQQTGLLGVKSDIYSLGVMLLQIITGKPPMGVAHLVQEAIDNDKFLEVLDPTITDWPIEETLSYARLALKCCEMRKRDRPDLGSIILPELNRLQNLGEVASKTLILPTKHVND 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03506 384 ProSitePatterns Protein kinases ATP-binding region signature. 104 125 IPR017441 GO:0005524
Pste3g03506 384 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Pste3g03506 384 Gene3D Transferase(Phosphotransferase) domain 1 171 374 - -
Pste3g03506 384 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 70 170 - -
Pste3g03506 384 Pfam Protein kinase domain 102 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03506 384 Gene3D Phosphorylase Kinase; domain 1 74 170 - -
Pste3g03506 384 PANTHER OS02G0152300 PROTEIN 2 370 - -
Pste3g03506 384 ProSiteProfiles Protein kinase domain profile. 98 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03506 384 SUPERFAMILY Protein kinase-like (PK-like) 81 356 IPR011009 -
Pste3g03506 384 SMART serkin_6 98 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03506 Pste-Chr3 27605277 27606531 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03506 31 369 Receptor kinase-like Gene Family AT5G12000 61.652 2.20e-159 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Pste3g03506 Pkinase 8.7e-44 CL0016