Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03479 AGTATATGTATTACTACTAGTTGGTTTTTGCAGAGAGAAGCAGCAAGCTTAAGGCAACAGCTGCAGGATTTGCAACACTGCTGCAGGCAACTGATGGGTGAAGGACTTTCTGCTTTGGGTATTAATCAGCTAAAGCAACTCGAAAATCAATTGCAAATGAGTTTGAATAACGTTCGCATGAAAAAGGATCAAATTTTCAGAGATGAGATCAAAGAACTGCAACGAAAGGGAAGCTTCGTTCATCAACGAAATGAAGAACTTCATATGAAGATAGACCATATCAACAAAGAAAATGCAGAACTACAGAAGGTTATTGAAGCAAGGCAAAAGGAAGAAGAAAGGGTAACCCTCAATCCTCCACATGCTATGAGCAATGGATATGATATACTTAACTGGACTAACCCTAGTAATCTGCAGCAAAACCAGCCTCATCAGTATCAACGCAGTGAACCACCAGTGGAAGCAATGATTTCGGGGCATTCCCTCAAATTGATGATGTAAAAAATTTAACGTCAATAATATGTAATATATTTTAGAGAAATATTAGCTTTTGAAAAAGTAAGGGATTATTCTCCAAATATAAACAGTACTAAAGTGCTATAAGCTAAGATTTTTATATCCTTATTTTGGTTATAAAGTAACAAGCCAAGTCTGTAGTGCAATAGATTACAGCTTCATTGGTG 683 0.3646 SICITTSWFLQREAASLRQQLQDLQHCCRQLMGEGLSALGINQLKQLENQLQMSLNNVRMKKDQIFRDEIKELQRKGSFVHQRNEELHMKIDHINKENAELQKVIEARQKEEERVTLNPPHAMSNGYDILNWTNPSNLQQNQPHQYQRSEPPVEAMISGHSLKLMM 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03479 166 Pfam K-box region 9 91 IPR002487 GO:0003700|GO:0005634|GO:0006355
Pste3g03479 166 ProSiteProfiles K-box domain profile. 7 97 IPR002487 GO:0003700|GO:0005634|GO:0006355
Pste3g03479 166 Coils Coil 14 34 - -
Pste3g03479 166 Coils Coil 84 114 - -
Pste3g03479 166 MobiDBLite consensus disorder prediction 113 150 - -
Pste3g03479 166 MobiDBLite consensus disorder prediction 127 148 - -
Pste3g03479 166 Coils Coil 41 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03479 Pste-Chr3 27404668 27412012 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03479 9 143 MADS-box Gene Family AT3G57230 43.796 1.49e-26 98.2