Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03476 GTGAGGGGTGAGGGGAAAGGTGAGATCTGTGTGTGATTTGAGAAAGAGGGAAAGGGAAAGGGATCTAGGGTTTGAGGATGGATAAGGAGAAATGTGAAGGTTTAAGTGATGAGGCTGATATTAGCAGAATGGCAGATAATCCCCGGAGAAACAGAGGTCACAGGCGTGCTCATTCTGAGATTCTGACTCTACCGGATGATATCAGCTTTGACAGCGACCTTGGGGTGGTGGGTGGCGGCGATGGCGACGGACCATCATTCTCCGACGAGGCCGAAGAGGACCTGCTCTCGATGTACCTTGACATGGATAAGTTGAATGCATCGTTGGGGTCGAATTCCAATAATGCCCCTCATCCTCCTCCTGCTCCCGGTGACCTTGAAAGGCCCACCAGAGTGAGACACCAACACAGTCAATCCATGGATGGCTCCCAAGACATCTCCGCCGCTGACTCCAAAAAAGCCATGTCCGCCGCCAAGCTTGCCGAGCTCGCCTTGATTGACCCCAAGCGTGCTAAAAGGATTTGGGCCAATAGGCAATCCGCCGCTAGGTCTAAAGAGAGGAAGATGCGTTACATTGCTGAACTTGAAAGAAAGGTCCAAACTTTGCAAACCGAAGCGACTTCTCTGTCTGCTCAATTAACTCTCCTGCAGAGAGATACTAATGGCTTGAATTCTGAAAACACTGAACTCAAGCTCCGTTTGCAAACTATGGAGCAACAAGTTCACCTCCAAGATGCATTAAACGACGCACTAAAAGAGGAAATTCAGCATTTGAAAATACTCACTGGCCAAGCTATGCCACCTAATAATGGAGGACCTATGATGAACTTTCCTTCCTTTGGAGGGACCCAGCAATTCTATCCCAATAATCATGCCATGCACACCCTTTTAGCTGCACAGCAGTTTCAACAGCTCCAGATTCATCCTCAGAAGCAGCAGCATCAGCATCAGCATCAGTTTCAGCAGCTTCAGCAACAACAAATGTTGCAGCAGCGGGAACAGCAGCAGCGAGAACAGCAATACCAGCAGCAGCGAGAACAGCACCACCAACAATCAAGTGAGTTGAAAATGAGAGAAGCTACTCCTGCTCCTTGCCCCAAAGATAATTCTTCGTCAGATGTAAATCCTTCAGTGGCCAAGGACTGTTGAAGAGTTCAGATTGCTCTCTATTGCTTCATAGATTTCCTTTTGCCTTGTGTCTTAGTGTGTTTAGATTATGGTCTTTGTTATATTTTTTCATTCTTAAACAGTACAAATGGTCCTAGTTAGAGATTGAGAATAAGATATTTGCATCTTTGCTACTGTGTAATACTAAAATTCTTTGATACTCTAGTTAATTGCTATGGGATATACAGGAGTAGGATCATGTGTGTTTTGTCTGCCTTTACTTGAATTTGCCTACCCCTATATCTAAATAGGCTGACTTTTATTAGCATGTTTGGATTGTAGATAGTTCCATGCCCAATCAAGAAATTTTGCTTTCCG 1484 0.4542 MDKEKCEGLSDEADISRMADNPRRNRGHRRAHSEILTLPDDISFDSDLGVVGGGDGDGPSFSDEAEEDLLSMYLDMDKLNASLGSNSNNAPHPPPAPGDLERPTRVRHQHSQSMDGSQDISAADSKKAMSAAKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLNSENTELKLRLQTMEQQVHLQDALNDALKEEIQHLKILTGQAMPPNNGGPMMNFPSFGGTQQFYPNNHAMHTLLAAQQFQQLQIHPQKQQHQHQHQFQQLQQQQMLQQREQQQREQQYQQQREQHHQQSSELKMREATPAPCPKDNSSSDVNPSVAKDC 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03476 356 SUPERFAMILY Leucine zipper domain 143 194 IPR046347 GO:0003700|GO:0006355
Pste3g03476 356 SMART brlzneu 139 203 IPR004827 GO:0003700|GO:0006355
Pste3g03476 356 MobiDBLite consensus disorder prediction 1 22 - -
Pste3g03476 356 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 141 204 IPR004827 GO:0003700|GO:0006355
Pste3g03476 356 MobiDBLite consensus disorder prediction 281 356 - -
Pste3g03476 356 MobiDBLite consensus disorder prediction 81 127 - -
Pste3g03476 356 MobiDBLite consensus disorder prediction 281 322 - -
Pste3g03476 356 MobiDBLite consensus disorder prediction 110 124 - -
Pste3g03476 356 Coils Coil 159 228 - -
Pste3g03476 356 Pfam bZIP transcription factor 143 201 IPR004827 GO:0003700|GO:0006355
Pste3g03476 356 CDD bZIP_plant_RF2 144 193 IPR044759 GO:0003700|GO:0006355
Pste3g03476 356 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 21 324 - -
Pste3g03476 356 Coils Coil 305 325 - -
Pste3g03476 356 FunFam probable transcription factor PosF21 142 195 - -
Pste3g03476 356 MobiDBLite consensus disorder prediction 339 356 - -
Pste3g03476 356 Gene3D - 142 195 - -
Pste3g03476 356 MobiDBLite consensus disorder prediction 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03476 Pste-Chr3 27365510 27367379 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03476 14 273 bZIP Transcription Factor Family AT1G06070 70.732 3.41e-132 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pste3g03476 bZIP_1 3e-09 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03476 3 27365510 27367379 Pste3g03476 3 27365510 27367379 ECH