Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03471 CACTGATATGCAACATCCAAATCCTTATCTTTGCATCCTCTCATTTCTCATATCTCATCCAGTAGTCACATCTTTTCTGTGTTCAACAGTTTCTCCCCACATTAAATACAAATTTTGTATAGTACTTCAAATGTTATGTTCTTCTTCTATTTTTGTTCACATCTCTGGATCATGTCCTAATCTTTCTACACCATCGTTCTTCATTTTTGGCTTTACAAATCCTGTCTGCTAAAGGGTTCTTAACATTTTCACTACAAGAGTTATTATTTATTAGCACATCGCCAATAAACTGGGAAAAAGAATAAACATGAAAATTCAGTGTGATGTGTGTGAGAGAGCTCCGGCAACAGTGATTTGTTGCGCGGATGAGGCGGCTTTGTGTGCTAAGTGTGACGTTGAAGTTCATGCTGCAAACAAGCTTGCAAGCAAGCACCAGAGACTGCTTCTTCAATGTCTATCCAACAAGCTTCCCCGATGTGACATTTGCCAAGATAAGCCAGCATTCATATTCTGTGTTGAAGACAGAGCACTGTTCTGTCAGGATTGTGATGAACCAATTCATTCAGCTGGCAGCCTTTCCGCAAACCACCAGCGCTTCCTTGCTACTGGTATCCAAGTGGCCTCAAGTTCTAATTGCACCAAAGACAATGAAAAAAGTCACTTGGAGCCTCCTAATAGGAATGCACAACAAGTTTCCACAAAAGTTCCTTCTCAACAAGTGCCTAGCTTCACATCCTCTTGGGCTGTTGATGACTTGCTGGAATTAACAGGCTTTGAATCACCTGAGAAAAAGGAATCTCTGCAGTTTGGAGAGCTGGAATGGCTGACAGACATGGGTATTTTGGGTGAACAATTTACTCAGGAAGCCTTGGCTGCTGCTGAAGTACCTCAGCTTCCAGTAACCCATAATGGCAGCGGTTTTGCCTCCTACAGAACCTCCAAGTCTTACACGCCTCACAAAAAGCCTAGGCTTGAAGTCCTAAACGATGATGATGATGAAGAGTATTTTACTGTGCCTGATCTTGGCTAAGTACACGCCTTCTCATATGGGGTGTTGCATGCATGATGGGAAAATGTTAATTATGGGAAAATAATAGTTTTTCTTTTCTTTTTTGAAAGTTCTTTTAGTTAAATCGTGGAAAAAAGATTATTATTTTTCCAAAATAAACTATTGCAGTCGGACATGTTGATATGTTGTATATTCCATAATTCATACTTCACTAAGGACAATAATTTTCACAAGTTGTATGGAGCGGATAATTGTCGTACTTGAGATGTTTTGTTGCTGGATAGCATAGAATCGATGCCTTTGAGGAATAAATTTTCCTTGTTTATTTTTCATACACCACTCCCAGGGTCACATCTTCCCCGTGAATTTGAGATGATTAGTTCCATTTTGTTTGGGGTAATGATACCTAATGTCTGGAAGAGCTTTTATCCCCATTTAACTTGTGTACCATTCTTTAAATACTAGCTTAAAATCCAAGATATTTCCAAG 1498 0.3939 MKIQCDVCERAPATVICCADEAALCAKCDVEVHAANKLASKHQRLLLQCLSNKLPRCDICQDKPAFIFCVEDRALFCQDCDEPIHSAGSLSANHQRFLATGIQVASSSNCTKDNEKSHLEPPNRNAQQVSTKVPSQQVPSFTSSWAVDDLLELTGFESPEKKESLQFGELEWLTDMGILGEQFTQEALAAAEVPQLPVTHNGSGFASYRTSKSYTPHKKPRLEVLNDDDDEEYFTVPDLG 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03471 240 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Pste3g03471 240 MobiDBLite consensus disorder prediction 200 230 - -
Pste3g03471 240 CDD Bbox1_BBX-like 5 47 - -
Pste3g03471 240 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Pste3g03471 240 MobiDBLite consensus disorder prediction 110 133 - -
Pste3g03471 240 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 239 - -
Pste3g03471 240 Gene3D Classic Zinc Finger 1 95 - -
Pste3g03471 240 CDD Bbox1_BBX-like 57 98 - -
Pste3g03471 240 Pfam B-box zinc finger 4 44 IPR000315 GO:0008270
Pste3g03471 240 Pfam B-box zinc finger 52 95 IPR000315 GO:0008270
Pste3g03471 240 SMART bboxneu5 52 99 IPR000315 GO:0008270
Pste3g03471 240 SMART bboxneu5 4 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03471 Pste-Chr3 27329599 27332294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03471 1 161 Orphan Transcription Factor Family AT1G06040 61.765 4.31e-67 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Pste3g03471 zf-B_box 1.1e-08 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03471 3 27329599 27332294 Pste3g03471 3 27329599 27332294 ECH
Pste3g03471 3 27329599 27332294 Pste1g02103 1 6597107 6601224 PCT