Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03468 ATGCAACTTGGTAAAGACCAGACCGTGGAGTTTGGGATTAAGGACTCCATTAATGTTGAGACAGTAGGAAATGCTACCATAGTGCAGATTAATAGCAGCACGGCTGATGAAAGCAAAGTGGGTTGCTGTTCTTTTAATCCTGCTTATAAACAAGATCATGATGATAATATAATTCAAGATTCTTCTGGAGGGGACACAATCCCATCAGGAATTCCTGTAGTATCGATTGCGTCAGCTGATGAGCCATATGTGGGCCAGGAGTTTGAATCTGAAGCTGGAGCACATGCATTCTATAATGCATATGCTACACGTGTTGGATTCATCATACGTGTAAGTAAGCTCTCACGATCAAGGCGTGATGGAACTGCTATTGGACGAGCTCTTGTTTGCAACAGAGAAGGTTACAGAATGCCAGACAAACGTGAAAAGATTGTAAGGCAAAGGGCAGAGACAAGAGTTGGTTGCAGGGCAATGATTTTGGTTAGGAAAGTAAGTTCTGGTAAATGGGTTGTTACAAAGTTTATAAAGGAACACACGCATCCTCTGACGCCTGGGAAAGGAAGAAGGGATTGCATTTATGAGCAATATCCGAATGAACATGATAAAATTCGAGAACTATCTCAGCAGTTGGCTATAGAGAAAAAGCGGTCTGCAACTTATAAAAGGCATCTTGAATTGATATTTGAGCATATTGAGGAGCGTAATGACACCCTTTCAAAGAAAATACAACACATAGTCGACAGTGTAAAGGAGTTGGAAAACCAAAGAACAACAGAGTCATAGATAGATTCAGGTCAGTTATCTAAGTATTTCAATTCTTTTTCACCGGATGAAACGCAGAATCAACTGTGCGGATCAAAAGTGCTGCTAGACATTTGGTGCAATAATATAGTTGCTGACCTAGGTATCTACTTCGTTACAGCATTAGGTGTCAGCTGAGTTCTCTAGTTCAGTTTGCAAAGTTCAATGGAACTTACTAATTCGTCATACTGCTTCATATGCTGTGATATTTTAGTTGTGGAAGAAACTAATTCAGTCAATGTACAGGTCCTTTGAATCCATTCTTCTCGAGTTACCTAACAATGTACAGGCGTGCAAATGCCTTACAGAATTAAATTGTTCCATTGTTGATGTTGTACAGTTTGATCAATGGCTGTCTTCTTTGTA 1167 0.3985 MQLGKDQTVEFGIKDSINVETVGNATIVQINSSTADESKVGCCSFNPAYKQDHDDNIIQDSSGGDTIPSGIPVVSIASADEPYVGQEFESEAGAHAFYNAYATRVGFIIRVSKLSRSRRDGTAIGRALVCNREGYRMPDKREKIVRQRAETRVGCRAMILVRKVSSGKWVVTKFIKEHTHPLTPGKGRRDCIYEQYPNEHDKIRELSQQLAIEKKRSATYKRHLELIFEHIEERNDTLSKKIQHIVDSVKELENQRTTES 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03468 260 Pfam FAR1 DNA-binding domain 97 183 IPR004330 -
Pste3g03468 260 Coils Coil 235 255 - -
Pste3g03468 260 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 10 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03468 Pste-Chr3 27302072 27304075 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pste3g03468 FAR1 3.7e-30 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03468 3 27302072 27304075 Pste3g03468 3 27302072 27304075 ECH
Pste3g03468 3 27302072 27304075 Pste1g02111 1 6648955 6650405 PCT