Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03467 CATGAAATCTGTTATTGAACGCTATAACAAGGTCAAAGAGGATCATCATCAGTTAATGAGTCCTGCTTCAGAAGTGAAGAGAGAAGTAGCAAGTTTGAGGCAACAAGTGCAGCACATGCAAGAATGCCACAGGCAGATGATGGGAGAAGAACTTAATGGTTTGGGTATTAAAGAGTTAGGGATTCTGGAAAATAGACTGGAGATTAGTTTAAAAGGTGTTCGAACGAAAAAGGATCAAATTCTGATTGATGAGATCAAGGAGCTACACCAAAAGGGGATCCTGGCTCATCAAGAAAATGTAGAACTTCATAGAAAGATAAGCCTTGTCCGCAAGGAAAATGAACAACTACAAAAGGTTATTGAAGCTAAGCGTAGAAAAGAAGTTCTTGCAACTTCCAATCCTCCATACACTATCAACTATGGATATGATATACTTGGTCCTGTCAGTCTCCACCTAAGCCAGCCACAACACAGTGAAACACCAGCCAAAGCAATTAAATTGGGATTACAGCTGCAATAGCAAAAAGGCAAAAACTGTTCCAAAATTAGGGATGGTGATAAATTCATACAAGCTGCCAACACTTGGC 587 0.3986 MKSVIERYNKVKEDHHQLMSPASEVKREVASLRQQVQHMQECHRQMMGEELNGLGIKELGILENRLEISLKGVRTKKDQILIDEIKELHQKGILAHQENVELHRKISLVRKENEQLQKVIEAKRRKEVLATSNPPYTINYGYDILGPVSLHLSQPQHSETPAKAIKLGLQLQ 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03467 172 Pfam K-box region 23 106 IPR002487 GO:0003700|GO:0005634|GO:0006355
Pste3g03467 172 ProSiteProfiles K-box domain profile. 22 112 IPR002487 GO:0003700|GO:0005634|GO:0006355
Pste3g03467 172 Coils Coil 99 126 - -
Pste3g03467 172 Coils Coil 22 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03467 Pste-Chr3 27289005 27299401 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03467 1 168 MADS-box Gene Family AT3G57230 46.893 3.23e-40 133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03467 3 27289005 27299401 Pste2g01787 2 18247906 18259458 PCT