Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03453 CTTGCATCCCACATCCACACGCACTTGACTTCATCAGGAAGACTTCTTCTCTATTCGTTTCTTCTTCTTTGCTTCAAACTTTCTCATTCTTTCTCTTCGTCTGTCGTAATTAAGAACACAACACCAATCATTAGCCATGTCTTCTCTCTGGTTTCTTAAAATAGCCCTCAAATGCCTTGATCACTTCGCATGGCCCCTTCTTGCTTTGGGGTATCCTTTATGCGCTTCCGTACAAGCAATCGAGACTGATTCCTATAAAGAAACTAAGAATTTGATCTCATATTGGATACTTCTCTCGTTAATATGCCTCTTTGAGTTCCAGTTCTGGTATTACATTAAGCTAATGATCATCTTCTGGCTCATCATACCAGACTTTGGTCGAGCTTCTTATACCTATAATAACCTTATCCGTACTTGCATGTCCTTCAAACCACAAGCAATCATATGTAGGTTAAAAAAATGGAGGAAATTTTTTGCCAAGTTTATTGTCAAGGAAGATGACTTTTTACAGCATGTAGAGAGATATGTAAAAGAGAATGGAACCGAAACCTTAGAGAAACTCATTGCTCGCAAGAACACAAACCTATTGAAGAACACAACTTCTAAACCTGTTCCAGAAGCAACAAATGCAATTAGAGATATTGATAATAAAGAAATGCAGCAGGTGAAGTTTTTGTGTTACTATTTCAGTTATAACAGTAAAATAATTCTTGTTTCAAGGACACCCATCCCAACAAATGAGAAAAAGGTCCAAACAGAGCACAAAGCCATCAAGGATGTGGAGGTGATCGAGAAAAAAGAAATTTCTGCAGGCAAACACGATAATCCTGTGATGCCTAACCTTGCGTCAAGTCAGAATGCTTCAGCAGCTATGGTGGAAACTAAAGGAGGAGCGGGGGAAGAGAGAGTTAGTGGAGAGGTTCCTGAGAGTTGTACTCATAAGGAAGTGCAGAATGAGTGGACTTGCGCCTTATGTCATTTAACAACAACGAGCGAGAAAACCTTGAACAGCCACCTGCAAGGAAGGAAACACAGGGCTAATGAGGAAGCTCTGAAGGCAAAGAATCAACCTGTTCAACAGAAGCTGAAAAGTGATCAGTCCAAAGAGGAATTGAAACAGAAAAACAATGAGCAAAAGAAACCACATAAACCTGCTGCAACCAATCATTCCAAATTTATATGTGAAGTATGTAATGTCTATTGCCCTTGCGAGATTACCTTACAATCTCACAAAATTGGGAAGAAGCATTTGGCTAAAATTAAAACTTTAATCTAAAGTATATATATATATATATTAACAAGTAAACAATGTCTGGCAGCAGTTCCACCTTGTTTCAGATGATAGACCGTTTAATGTGACTTTGTTTTGGAATTTGTTGTTCAGTGTTGGTGGAGAATGGAGGTAGTGAAATATTGAGTACGTACCCCACTTCCAGACATACTCATTATCGTTGTTTCTTTCTACATAGCAATAATGTATCAAACATTTAAACCACCCGCTAGTCGCATCAGTACAATTGTTTTTATGTCATGAACTCAAGGAAAGTATCAAGAATGAA 1559 0.3823 MSSLWFLKIALKCLDHFAWPLLALGYPLCASVQAIETDSYKETKNLISYWILLSLICLFEFQFWYYIKLMIIFWLIIPDFGRASYTYNNLIRTCMSFKPQAIICRLKKWRKFFAKFIVKEDDFLQHVERYVKENGTETLEKLIARKNTNLLKNTTSKPVPEATNAIRDIDNKEMQQVKFLCYYFSYNSKIILVSRTPIPTNEKKVQTEHKAIKDVEVIEKKEISAGKHDNPVMPNLASSQNASAAMVETKGGAGEERVSGEVPESCTHKEVQNEWTCALCHLTTTSEKTLNSHLQGRKHRANEEALKAKNQPVQQKLKSDQSKEELKQKNNEQKKPHKPAATNHSKFICEVCNVYCPCEITLQSHKIGKKHLAKIKTLI 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03453 379 Pfam Zinc-finger of C2H2 type 275 299 - -
Pste3g03453 379 Pfam Zinc-finger of C2H2 type 347 371 - -
Pste3g03453 379 MobiDBLite consensus disorder prediction 291 340 - -
Pste3g03453 379 Gene3D Classic Zinc Finger 314 377 - -
Pste3g03453 379 SUPERFAMILY beta-beta-alpha zinc fingers 337 377 IPR036236 -
Pste3g03453 379 Coils Coil 291 311 - -
Pste3g03453 379 PANTHER OS06G0651300 PROTEIN-RELATED 239 378 - -
Pste3g03453 379 SMART ZnF_U1_5 344 378 IPR003604 GO:0003676|GO:0008270
Pste3g03453 379 SMART ZnF_U1_5 272 306 IPR003604 GO:0003676|GO:0008270
Pste3g03453 379 Gene3D Classic Zinc Finger 264 312 - -
Pste3g03453 379 MobiDBLite consensus disorder prediction 292 306 - -
Pste3g03453 379 SUPERFAMILY beta-beta-alpha zinc fingers 266 311 IPR036236 -
Pste3g03453 379 MobiDBLite consensus disorder prediction 318 339 - -
Pste3g03453 379 Pfam TB2/DP1, HVA22 family 27 93 IPR004345 -
Pste3g03453 379 SMART c2h2final6 275 299 IPR013087 -
Pste3g03453 379 SMART c2h2final6 347 371 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03453 Pste-Chr3 27163780 27167730 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03453 273 378 C2H2 Transcription Factor Family AT2G19380 27.523 3.90e-07 50.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03453 3 27163780 27167730 Pste3g03453 3 27163780 27167730 ECH