Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03417 ATGGACGGCGGCGGCGGCGGGAATCGAGCGGAGGCGGAGCGCTGGCTGTACACCGCCAACAAGCTGCTCAGCGCGCGTGACCTGCACGGGGCCCGTTCCTTCGCGATCCGGGCGCGCGAATCGGACCCCAGTTACGAGGCCTCGGAGCACCTCCTCACGGTGATCGACACGCTCCTGGCCGGGGAGTCGCGGATCAACGACCACCACCGCGACTGGTACGGGATCCTCCAAATCCTCCGCTACACCACCAACATGGACCACATCGCCGCCCAGTACCGCCGCATCGCCCTCCTCCTCGACCCCCACCGCAACCTCTTCGCCTTTGCCAGCCATGCTTTTTCCCTCGTCAACGACGCCTGGTCGGTGCTCTCCAATCCCGCCAAAAAAGCCATGTACGACAGCGAGTTGCGTCTGCTCACCACCCCGGTGCCGCCGCAGCCCCAGCAACTTCCTCCTCCTCCGCCGCAGCCTCAGCCCACGCCGAGGAGAAACCCTAGATCGAGGGACGATTCGGCCGAGCCAACTCGCTCCCATCCGAATCATAACCGTTCCGAGTCGACTCGCCAGAACCAGACTCGAACCGCCGAAACCGATGGAGGAACGAGTTTTTGGACCTCGTGTCCTTATTGTTATGTTCTCTATGAATATCCCAAGGTGTACGAGGAGTGTACCTTGAGGTGTCAGAGTTGTCGGAGGGGGTTTCATGCGGTGGTGATACGGTCGCCGCCGCCGCCGCTGAGTGGGAAAGATGGTTCCTATTGTAGTTGGGGTTTTTTCCCGTTAGGGTTTTCTGGAAATTCGAAAGATGTGAACGGGTTTTCCTCCAATTGGAACCCGTTTTCCCCTTTGTTTCCTTGCCCCTTGAAGGGGTCATCTTATAGAAAGCCTCAGAGGAATTGGGCTTACTATGACGACGAGGCTGCAGCCGCTTTTATCGAGTTATCTGATCCGAGTGATGATGATTCCGGTGATGGGGACTGGAGGATTGGAAAGAGTGGGGGGAGGAAGAAGACTAAGGTTCATAAGAGGAAAAATTCTGGTGATGGTAGGAGAGAGTCTGCGGGGAGACCTAGGAGGGGTGTTCATGCTGGAAATCAAAATGCTGCTTCTGGTGATCATACTGTTGCCACTGGTAATGCTAATGCTGCCAATGCTGTGCCATCTGGTGCCAGGGCAGATTCTAGCAAGAAAGCTGCCTTGGCTGCTTCTAGGAGGAGGGGTGCTGGAAACTTGGGGAAGTTGGATTTGAATGTGGAGTTCAGCAATGAGGTGGAAGAGCCATCCCGTGGAGCGCGTGATCGGGAAGGGAATGCTGCTGGACATGCTGAGGATAATATAGAAGGAATTGGGTTTTTTGAAGGTCTTGATGAGTTTCTCAGTAGCCTGCCCATTCTCAATGTTGTGGCAGATGATAAAGTTAAGGGTCATTAG 1431 0.559 MDGGGGGNRAEAERWLYTANKLLSARDLHGARSFAIRARESDPSYEASEHLLTVIDTLLAGESRINDHHRDWYGILQILRYTTNMDHIAAQYRRIALLLDPHRNLFAFASHAFSLVNDAWSVLSNPAKKAMYDSELRLLTTPVPPQPQQLPPPPPQPQPTPRRNPRSRDDSAEPTRSHPNHNRSESTRQNQTRTAETDGGTSFWTSCPYCYVLYEYPKVYEECTLRCQSCRRGFHAVVIRSPPPPLSGKDGSYCSWGFFPLGFSGNSKDVNGFSSNWNPFSPLFPCPLKGSSYRKPQRNWAYYDDEAAAAFIELSDPSDDDSGDGDWRIGKSGGRKKTKVHKRKNSGDGRRESAGRPRRGVHAGNQNAASGDHTVATGNANAANAVPSGARADSSKKAALAASRRRGAGNLGKLDLNVEFSNEVEEPSRGARDREGNAAGHAEDNIEGIGFFEGLDEFLSSLPILNVVADDKVKGH 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03417 476 SMART dnaj_3 70 128 IPR001623 -
Pste3g03417 476 MobiDBLite consensus disorder prediction 184 199 - -
Pste3g03417 476 ProSiteProfiles dnaJ domain profile. 71 136 IPR001623 -
Pste3g03417 476 MobiDBLite consensus disorder prediction 163 183 - -
Pste3g03417 476 MobiDBLite consensus disorder prediction 144 162 - -
Pste3g03417 476 MobiDBLite consensus disorder prediction 141 199 - -
Pste3g03417 476 SUPERFAMILY Chaperone J-domain 67 137 IPR036869 -
Pste3g03417 476 MobiDBLite consensus disorder prediction 314 405 - -
Pste3g03417 476 Pfam DnaJ domain 71 133 IPR001623 -
Pste3g03417 476 ProSitePatterns Nt-dnaJ domain signature. 113 132 IPR018253 -
Pste3g03417 476 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 351 - -
Pste3g03417 476 MobiDBLite consensus disorder prediction 367 384 - -
Pste3g03417 476 Gene3D DnaJ domain 60 141 IPR036869 -
Pste3g03417 476 CDD DnaJ 71 125 IPR001623 -
Pste3g03417 476 MobiDBLite consensus disorder prediction 422 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03417 Pste-Chr3 26889465 26890895 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03417 11 475 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 43.182 6.76e-111 334