Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03407 AATGAATCATATATCATCCAGCGGTTGGTACCACTTGTTACGATGATAATAATTTTGACTCAGCAAATAACAACAGAGAACACAAGAAGAATTGAGAGAGCAAATGACGGAGAGGTGGTGAATGATACCATTACCACCAAACACAAATCCTTTGGATCCAACACAAACACAAGAATTATTTTCTCCCTTCAACTTTCTCTCAATTCTTTCTCCCACCTTTTCCTTTTCCTTTTTTTTCTTTTGCTTTGCCTAACAACATTCCAAGAGAACGAGTGTTGTAGTATTGCTTCATCAATGGGAGCTGGTTGCTCTAAATTCTGTCTATGTTGGTGCCACTCCAACACTAAATCCAACCTTCATGACTTACCTGACAATGGTGATCTCATATCTCACTATTCACACCATCTGGTCCAACAAAAACAAACAAACAAAATAAGAGGCTTATTGTTTACTTCATCACTGTGTTTTGGAATTAAAGTTTTGGTTTTTAACACGGATTCGTTTCTGGGTACAGAGAATGGGGACGAGGGTGAGAAGAAAGATTCTTGGGTTGGCTTCACCGAGTTCACCTTGGATGAACTGAGAAGTGCCACGTCAGCGTTTTCACCCGACAGCATAGTCTCAGAACACGGTGAGAAGGCTCCCAATATTGTCTACAAAGGAAGGATAGAAGATGATAGGTTGGAGGAAGCACGGGCAGTGGGGCAGCTGAGGAATGAGCGGTTGGCTAACTTGGTTGGTTGTTGCTGTGAAGGAGAAGAGAGATTGCTTGTTGCAGAGTTTATGCCCAATGAAACTCTCTCCAAACATCTCTTTCACTGGGAGAGCCAGCCAATGAAATGGGCAATGAGGCTGAGAGTGGCCTTGTATTTAGCACAAGCATTGGAGTACTGCAGCAGTAAAGGAAGGGCATTGTATCATGATCTTAATGCTTATAGAGTTTTGTTTGATCAGGATGGAAACCCTAGGCTCTCTTGTTTTGGACTTATGAAAAACAGCAGAGATGGCAGAAGCTATAGTACAAATTTAGCCTTCACCCCACCTGAGTATTTGAGGACAGGAAGAATTACCCCAGAAAGTGTAATCTACAGTTTTGGCACACTCTTGCTTGATCTTCTGAGTGGCAAGCATATTCCACCCAGTCATGCGCTTGACCTTATACGAGGTAAGAACTTTGTGATGCTGATGGACTCATGTTTGGAAGGTCATATTTCAAATGATGATGGAACGGAGATAGTGAGATTAGCTTCACGCTGTTTACAGTATGAGCCTCGCGAGAGGCCAAACGCCAAGTCACTTGTGATTGCTTTAACTCCTCTTCAGAAAGAAACTTCAGTTCCATCACAAGTTTTGTTGGGCATACCAGAAGAGAGTGCCCCATCAAAGGAAGCAGCTCCATTGACCCCTTTTGGTGAAGCTTGTTCTAGAAGAGATCTCACTTCAATATATGAAATTTTGGAAACGGTGGGGTACAAGGATGACGAAGATGTAGCGAATGAGCTATCCTTCCAAATGTGGACAGACCAAATACAAGAAACACTAAATTCTAAGAAGCAAGGGGATTCTGCTTTCCATGCCAGAGACTTCTATAAGGCCATTGAGTGCTATACGCAATTCATCGATGGTGGAACCATGGTATCACCAACTGTATATGCAAGGCGCTGCTTTTGTTACCTTATGAAGAACATGGTACAAGAAGCAGTGGGAGATGCCATGCAAGCTCAATCAGTATCCCCCACATGGCCAACTGCATTCTATCTTCAAGCAGTGGCCCTCTTCAGCCTTGGAATGGACCATGATGCAGAGGAAAGTCTTAAAGATGGCACAAAACTAGAAACCAGAAAACATAGAAATTGAAGTGTATATACTTTTTGTATCTTTCTTTTGGTTCCCCTTCATTTCTCAAGGAAATATTTCAAGCATTAGCTGTTTGTATCTTTTTCTATCCACTATTTTCTCCGACAGTTTTCAAACTCTTGATTATCTATGCCACTTTTTTTTCCTTAAAAAGGTTGTAAAATTGC 2024 0.417 NESYIIQRLVPLVTMIIILTQQITTENTRRIERANDGEVVNDTITTKHKSFGSNTNTRIIFSLQLSLNSFSHLFLFLFFLLLCLTTFQENECCSIASSMGAGCSKFCLCWCHSNTKSNLHDLPDNGDLISHYSHHLVQQKQTNKIRGLLFTSSLCFGIKVLVFNTDSFLGTENGDEGEKKDSWVGFTEFTLDELRSATSAFSPDSIVSEHGEKAPNIVYKGRIEDDRLEEARAVGQLRNERLANLVGCCCEGEERLLVAEFMPNETLSKHLFHWESQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRVLFDQDGNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRITPESVIYSFGTLLLDLLSGKHIPPSHALDLIRGKNFVMLMDSCLEGHISNDDGTEIVRLASRCLQYEPRERPNAKSLVIALTPLQKETSVPSQVLLGIPEESAPSKEAAPLTPFGEACSRRDLTSIYEILETVGYKDDEDVANELSFQMWTDQIQETLNSKKQGDSAFHARDFYKAIECYTQFIDGGTMVSPTVYARRCFCYLMKNMVQEAVGDAMQAQSVSPTWPTAFYLQAVALFSLGMDHDAEESLKDGTKLETRKHRN 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03407 618 Gene3D Transferase(Phosphotransferase) domain 1 263 454 - -
Pste3g03407 618 Gene3D Phosphorylase Kinase; domain 1 175 227 - -
Pste3g03407 618 Gene3D Phosphorylase Kinase; domain 1 228 261 - -
Pste3g03407 618 FunFam probable serine/threonine-protein kinase At4g35230 511 618 - -
Pste3g03407 618 Pfam Protein tyrosine and serine/threonine kinase 225 435 IPR001245 GO:0004672|GO:0006468
Pste3g03407 618 SUPERFAMILY TPR-like 515 614 IPR011990 GO:0005515
Pste3g03407 618 Gene3D Tetratricopeptide repeat domain 511 618 IPR011990 GO:0005515
Pste3g03407 618 ProSiteProfiles Protein kinase domain profile. 145 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03407 618 FunFam probable serine/threonine-protein kinase At5g41260 263 454 - -
Pste3g03407 618 SUPERFAMILY Protein kinase-like (PK-like) 211 443 IPR011009 -
Pste3g03407 618 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 176 617 IPR045845 GO:0004672|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03407 Pste-Chr3 26793779 26797765 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03407 172 437 Glycoside Hydrolase AT3G07070 31.090 4.31e-32 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Pste3g03407 PK_Tyr_Ser-Thr 1.3e-22 CL0016