Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03403 TTCCTTTTCCACCTCTCATCATGACTCATCCCTACTGCTCCAATGACTTCAATGCTTGGTTTGACCTCAATTCACCATGCCTTTTCTCTCCTTCTGCATCTCCTTGCTCCAACCCGCCATTCTATTTTCCTACTACATACCATCATAATTGCTCTACTCACATCTCTTTTACTCACCACCAATCTTCTCCCTCGTTTCCTCCTCCAAAAGAAGCACTTCCTCTCCTTAATCTAAGCCCTGCAAAAGGCCAAGATCTTGAATCTTCCTTCAGTGCCATGAAAGTCAACAAAGAGAAGGAGAAAGAACTAAGCATGTCATCTATTAATAACTCTTTAGATGATGAAACTGTTACGGTGGCTTTGCACTTAGGGCTTCCGAGCACTAATACGTCACCTGATCTAACTTCAAACATATACTCAGACAAAGAAGAAAAAGCCACTGTTGCTTCTGAGTATTCGCCAACTAGAATTAACAAGGGTCAGTATTGGATCCCTACACCTGCTCAAATTCTGATCGGTCCAACACAGTTCTCATGCCCCCTTTGTTTCAAGACGTTCAACAGATACAACAACATGCAGATGCATATGTGGGGGCATGGATCTCAATATAGAAAGGGGCCAGAGTCTCTAAGGGGAACTCAACCAACAGCAATGCTTAGACTCCCTTGCTATTGCTGTGCACCGGGATGCAAGAACAACATTGACCACCCAAGAGCAAAGCCACTCAAAGATTTTAGGACCCTTCAAACCCATTACAAGAGAAAGCATGGAATTAAGCCCTTCATGTGTAGAAAATGTTGCAAAGCATTCGCTGTGAGGGGAGATTGGAGGACTCACGAGAAGAACTGTGGGAAGTTATGGTATTGCTCTTGTGGCTCAGATTTTAAGCACAAAAGATCTCTCAAAGATCATATCAAGGCATTTGGGAATGGACATAAAGCTTATGGAATAGACTGTCTTGATCAAGATGATGAACCTGGCTCTGAAATTGAGCAAGAAAATAATGAATCTTTCATTTCAACTCATAGTTAATGTGTTTTCAACTATTAAGACA 1053 0.4198 MTHPYCSNDFNAWFDLNSPCLFSPSASPCSNPPFYFPTTYHHNCSTHISFTHHQSSPSFPPPKEALPLLNLSPAKGQDLESSFSAMKVNKEKEKELSMSSINNSLDDETVTVALHLGLPSTNTSPDLTSNIYSDKEEKATVASEYSPTRINKGQYWIPTPAQILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHIKAFGNGHKAYGIDCLDQDDEPGSEIEQENNESFISTHS 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03403 336 FunFam Zinc finger protein WIP2 223 305 - -
Pste3g03403 336 Gene3D Classic Zinc Finger 251 328 - -
Pste3g03403 336 SUPERFAMILY beta-beta-alpha zinc fingers 236 274 IPR036236 -
Pste3g03403 336 ProSiteProfiles Zinc finger C2H2 type domain profile. 170 197 IPR013087 -
Pste3g03403 336 ProSitePatterns Zinc finger C2H2 type domain signature. 172 192 IPR013087 -
Pste3g03403 336 Gene3D Classic Zinc Finger 169 192 - -
Pste3g03403 336 PANTHER ZINC FINGER PROTEIN WIP2 38 329 IPR043584 GO:0003700|GO:0010468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03403 Pste-Chr3 26768338 26770482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03403 63 329 C2H2 Transcription Factor Family AT3G57670 62.258 1.71e-131 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pste3g03403 None None None