Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03382 AAACAGAGGTATACTAGTTGTTGCATTGCAGCCTCCAGGAATGTTGGCGTGGGAAATACAAAAATTGGTGGGCCCACAGCATTTGAAAATCAAGGTAGCTGTACGTGTAAGGAGCATGAGTTCCATTTTCTGTAACCCTTGCACCACTCAAGCCAGAGAACAGAGTGCTTTTCAGCTTTGCGCCAAAGTTTCAGATGAGAGAAGCAAAGGAGAAACTGTTCTAAGTGTTGTATCAGACCAAGGGGATGCCATTAAGTTAACAGAAATCAGTGGAGGGATTCAGGGAGAGAAGGAGGACATAACAGTAACATGGGAGAATCTGTGGGTCACTGTTTCAAGTGGAAAGAAAAAGAAGCAAATTCTGCAGGGTCTTACAGGTTATGCCCGCCCAGGAAGGATTATGGCCATAATGGGCCCTTCCGGATGTGGAAAGTCTACACTTCTTGATGCTTTAGCAGGAAGATTGAGCTCAAACATGAATCATACAGGGAAGATTCTGATCAATGGCCATAAACAGGCACTGGCCTATGGGACATCGGGCTATGTAACACAAGAAGATGCTATGCTGTCAACTTTAACCGCTGGGGAAACTTTATACTATTCTGCTCAGCTCCAATTTCCAGATTCCATGTCCATAGCAGAGAAGAAGGAACAAGCAGATATTACACTCAGAGAAATGGGTCTGCAAGGTGCCATTAACACAAGGGTTGGAGGGTGGGGTGCTAAAGGCCTCAGTGGGGGACAAAAGAGGAGACTTAGCATATGCATTGAGATTCTAACACGACCAAGACTTCTCTTCCTTGATGAACCAACTAGTGGACTTGATAGTGCAGCTTCCTATTATGTTATGAGTAGAATTGCAACTCTAAATCTAAGGGATGGAATTCGAAGAACTATTGTAGCATCCATCCATCAACCTAGCAGTGAAATTTTTGAACTTTTTCACGACCTATGTCTTCTGTCTTCAGGTGAAACAGTATACTTTGGTCCAGCCTCTGATGCAAATCAGTTTTTTGCTTCAAATGGTTTCCCTTGTCCAACTCTCCACAATCCTTCTGATCACTACTTAAGGATCATAAACAAAGATTTCGAACAGGATGCTGAAGAAGGCTTTGGTGTGGGGGTAACTACAGGAAAAGCAATTGATATCCTCGTAAAGTCTTATAAATCGTCTCAAATTAGAAAACAAATTTCAAAGGAAGTGGGAAAAATAGTTGAAAGTGATTCTGGTGCAATAAAGAAGCACAGGATTCATGCTGGTTTTCCCACTCAATGCCTTGTTCTTATAAGAAGATCTTCCTTGCAATTGTTTCGTGACATAAGCAATTACTGGTTACGTTTAATTGTGTTTATTGTAATAGCTTTTAGCATTGGCTCTATCTTCTATGACATAGGCACAAGTAATGAATCTATTCAGGGGAGAGGTTCTCTGCTCATATTTTTTGTTTCAGTTCTGACATTCATGACCCTTGTTGGTGGATTCTCTCCTCTTTTGGAAGAAATGAAGGTATTTGAACGAGAGAGATTGAATGGGCACTATGGTATAACGGCATTTCTCGTAGGCAACATATTCTCTGCTGTTCCTTACATGCTAATGATCTCTCTTATTCCTGGAGGAATAGCTTACTACCTGTGTGGAATGCACAGAGGACCAGAACGCTTCTTCTACTTCACTTCAGTGCTATTTGCCATAGTGATGTGGGTTGAGAGCCTTATGTTGGTTGTGGGGAGCATCGCCCCCAACTATGTAATAGGGATGTTCCTTGCTGGTGGAGTTGAAGGACTAATGATTCTAACTGGTGGATTCTATAGACTGCCAAATGATCTTCCCAAACCATTGTGGAAATACCCTTTATACTACATTTCCTTCGTAAAGTATGCCTTCCAAGGATCATTCAAGAATGATTTTGATGGCTTAACATTTTCTATAGACCAAGTTGGAGGAGGAACCACAACCATTAGGGGTAGAGAAGTACTAACTGACACATGGCATGTAGAGATGGGTTACTCTAAGTGGGTTGATCTTGCTATCATGTTTGGAATGATTGTTCTGTATAGAGTTCTGTTCTTGGTCATCACTAAATGCAAGGAGAAGCTCAAGCCTCTGATGGGAGTAAAGAATGACATTAGGGTGACATGGGAGAATTTGGAGGCCACTGTTACGAATGGAAAGAATAAGAAACTTATTCTGCATGGCCTTACAGGTTGTGCCCTGCCTGGGAGGCTTCTTGCTATAATGGGTCCTTCTGGCTGTGGCAAATCCACACTTCTTGATGCTTTAGCAGGGAGATTGAGATCAAACATAAATCAAACAGGAAAGATTCTAATCAATGGCCACAAACAAGAACTGGCTTATGGAACATCAGGTTATGTAACACAAGATGATGCTATGCTGTCATGTTTAACAGCTGGGGAAACTTTATACTATTCTGCTCAGCTCCAATTTCCAAATACCATGTCTATAGCAGAGAAGAAGGAAAGAGCAGATATTACACTCAGAGAAATGGGTCTCCAAGATGCCATCAACACAAGGGTTGGAGGGTGGAGTTCTAAAGGCCTCAGTGGAGGACAAAAGAGGAGACTTAGCATTTGCATCGAGATTCTGACACGCCCAAAACTTCTCTTCCTTGATGAACCAACTAGTGGACTTGATAGTGCAGCTTCCTATTATGTTATGAGTGGAATTGCAACTCTAAATAAAAGGGATGGTATTCAAAGAACTATTGTTGCATCCATCCATCAGCCTAGCAGTGAAGTTTTCCAACTTTTCCATGATCTTTGTCTTCTGTCTTCAGGGGAGACAGTATATTTTGGTCCTGCCTCCGATGCAAATCAGGAAGGAATGAGTAGCGAAGAAGCAACTGATATCCTCGTGAGATCTTATAAATCATCTGAAATTAGACATCACATGCAGAATGAAATCGCAAATATAAATGAAACCGTAGGGAACAACGAATGGGGTGGAAGAGGGAAGAAGAAGATACACGCTGCATTCCATAGTCAGTGTGTGGTACTAATAAAAAGATCTTCACTGCAAATCTATCGTGACATAAGCAATTATTGGCTACGTCTGGCCGTCTTTGTAGCAGTATCTATAAGCATGGGCTCTATCTTCTATCACATTGACCCATCTTTGCGTTCCATTCAGGTGTTTGAGCGAGAGAGACTGAATGGGCACTATGGTGTTACAGCTTTTCTCATAGGCAACATATTCTCAGTTGTTCCTTACATGCTATTGATATCTCTTATTCCTGGAGCTATAGTGAGTTACCTTTCTGGATTACACAAAGGATTAGAAAACTTTCTATATTTTGCCTTTGTCCTATTTGCTATTGTGATGTGGGTTGAGAGCCTTATGATGGTTGTTGGGAGTGTCTTTCAAAACTTCGTAATGGGTGTGATTATTGCTGGGGGAATTGAAGGGCTCATGATCTTAACAAGTGGATTCTATCGATTGCCAAATGATCTTCCCAAACCATTTTGGAAATACCCTTTCTACTATGTTTCCTTCCTCACCTATGCTTTGCAAGGATTGTTAAAGAATGAATTTCAAGGTTTAACATTTTCTTTGGATCAAGACGGAGGTGCCAAAGCCATTAATGGTAGAGATATATTGGCTCAGACATGGCATGTGCAAACGGGTCACTCTAAGTGGGTTGATCTTGCTATCATGTTTGGAATGATACTCATGTATCGAGTTTTATTCTTGGCCATCACTAAGTTAAAGGAGAAATTCAAACATGTTCATCTTGGCTTTAATGCTCCCCGAACAAAAATTTTCTCCAGAACCAACATCAATGAACTCTAGATAAGTAAAAAATGCATGGTTGATCATAATGTTGACTAAACAGTAGTTCGATCAACTTCTGCTCGGGTTATTAATTGTCATATCTCTATTAGTATTGTTAAGCTCATTTTAAAGTGAA 3926 0.4091 MLAWEIQKLVGPQHLKIKVAVRVRSMSSIFCNPCTTQAREQSAFQLCAKVSDERSKGETVLSVVSDQGDAIKLTEISGGIQGEKEDITVTWENLWVTVSSGKKKKQILQGLTGYARPGRIMAIMGPSGCGKSTLLDALAGRLSSNMNHTGKILINGHKQALAYGTSGYVTQEDAMLSTLTAGETLYYSAQLQFPDSMSIAEKKEQADITLREMGLQGAINTRVGGWGAKGLSGGQKRRLSICIEILTRPRLLFLDEPTSGLDSAASYYVMSRIATLNLRDGIRRTIVASIHQPSSEIFELFHDLCLLSSGETVYFGPASDANQFFASNGFPCPTLHNPSDHYLRIINKDFEQDAEEGFGVGVTTGKAIDILVKSYKSSQIRKQISKEVGKIVESDSGAIKKHRIHAGFPTQCLVLIRRSSLQLFRDISNYWLRLIVFIVIAFSIGSIFYDIGTSNESIQGRGSLLIFFVSVLTFMTLVGGFSPLLEEMKVFERERLNGHYGITAFLVGNIFSAVPYMLMISLIPGGIAYYLCGMHRGPERFFYFTSVLFAIVMWVESLMLVVGSIAPNYVIGMFLAGGVEGLMILTGGFYRLPNDLPKPLWKYPLYYISFVKYAFQGSFKNDFDGLTFSIDQVGGGTTTIRGREVLTDTWHVEMGYSKWVDLAIMFGMIVLYRVLFLVITKCKEKLKPLMGVKNDIRVTWENLEATVTNGKNKKLILHGLTGCALPGRLLAIMGPSGCGKSTLLDALAGRLRSNINQTGKILINGHKQELAYGTSGYVTQDDAMLSCLTAGETLYYSAQLQFPNTMSIAEKKERADITLREMGLQDAINTRVGGWSSKGLSGGQKRRLSICIEILTRPKLLFLDEPTSGLDSAASYYVMSGIATLNKRDGIQRTIVASIHQPSSEVFQLFHDLCLLSSGETVYFGPASDANQEGMSSEEATDILVRSYKSSEIRHHMQNEIANINETVGNNEWGGRGKKKIHAAFHSQCVVLIKRSSLQIYRDISNYWLRLAVFVAVSISMGSIFYHIDPSLRSIQVFERERLNGHYGVTAFLIGNIFSVVPYMLLISLIPGAIVSYLSGLHKGLENFLYFAFVLFAIVMWVESLMMVVGSVFQNFVMGVIIAGGIEGLMILTSGFYRLPNDLPKPFWKYPFYYVSFLTYALQGLLKNEFQGLTFSLDQDGGAKAINGRDILAQTWHVQTGHSKWVDLAIMFGMILMYRVLFLAITKLKEKFKHVHLGFNAPRTKIFSRTNINEL 1255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03382 1255 Pfam ABC-2 type transporter 291 355 IPR043926 GO:0140359
Pste3g03382 1255 ProSitePatterns ABC transporters family signature. 840 854 IPR017871 GO:0005524|GO:0016887
Pste3g03382 1255 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 698 943 IPR003439 GO:0005524
Pste3g03382 1255 CDD ABCG_EPDR 87 316 - -
Pste3g03382 1255 SMART AAA_5 726 915 IPR003593 GO:0016887
Pste3g03382 1255 SMART AAA_5 117 310 IPR003593 GO:0016887
Pste3g03382 1255 FunFam ABC transporter G family member 11 87 374 - -
Pste3g03382 1255 Pfam ABC transporter 724 868 IPR003439 GO:0005524
Pste3g03382 1255 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 701 930 IPR027417 -
Pste3g03382 1255 Pfam ABC-2 type transporter 1034 1170 IPR013525 GO:0016020|GO:0140359
Pste3g03382 1255 Pfam ABC-2 type transporter 410 621 IPR013525 GO:0016020|GO:0140359
Pste3g03382 1255 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 82 690 - -
Pste3g03382 1255 Pfam ABC transporter 110 259 IPR003439 GO:0005524
Pste3g03382 1255 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 89 334 IPR003439 GO:0005524
Pste3g03382 1255 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 89 325 IPR027417 -
Pste3g03382 1255 ProSitePatterns ABC transporters family signature. 231 245 IPR017871 GO:0005524|GO:0016887
Pste3g03382 1255 Gene3D - 88 342 IPR027417 -
Pste3g03382 1255 Gene3D - 697 973 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03382 Pste-Chr3 26603474 26624043 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03382 716 976 Calmodulin-binding Proteins AT2G36910 26.429 5.18e-09 58.9