Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03377 AAATGGGTAGCATTGACGATGAATCATGTGTTTATGAAACTAGTAAGCCTAGTTCAAAATCAATACCCCAGCAAAGGGTGATAGACATTGATAATGAAACCATGACACTGGAAATGGAAACTTTTAGAAGGGAAAGAAAGATGAACGAGAAAGGGGAAGGTGGTGAGATGGGTATATGCTTGACATGGAAAGATGTATGGGTAAATGCTTCCAATAGAAAGGGTGGAAGTAAATCACTTCTTCAAAGTCTTACTGGTTATGCTAAGCCAGGCCAACTCTTGGCAATAATGGGTCCTTCTGGCTGTGGCAAGTCCACACTACTTGATACTTTAGCAGGAAGACTAGGTTCAAACACAAGCCGAACAGGGGAGATTCTGATCAATGGTCACAAACAAGTACTGGCTTATGGAACCTCAGCTTATGTCACACAAGATGATACCTTAGTGACAACTTTAACGGTTAGAGAAACAGTGCACTATTCAGCTCAACTCCAATTACCTGACACCATGTCCAAAGAAGAGAAGAGAGAGAGAGCAGATTTAACAATCAGAGAAATGGGTCTTCAAGATGCCATTAACACTAGAATTGGAGGGTGGGGTAGTAAAGGCATAAGTGGGGGTCAAAAGAGGCGAGTTAGCATTTGCATCGAGATCCTAACACGCCCTAAGCTTCTTTTTCTTGATGAACCAACAAGTGGACTAGACAGTGCAGCTTCCTACTATGTCATGAAAAGAATCGCTGCTCTAGCTCAAAATGGTCACATTCAAAGGACTGTTATTGCATCAATTCACCAGCCTAGTAGTGAAGTTTTCCAACTCTTCAACAATCTTTGTCTTCTGTCTGCGGGTAAAACAGTTTACTTTGGACCTGCTTCTGCTGCAAGTGAGTTTTTCGCTTCAAGTGGTTTTCCTTGTCCTCCTTTCATGAATTCATCTGATCATTTACTGAAAACTATAAACAAGGATTTTGATCAGGACATTGAGGTGGGTTTAACAGGAAGCAAAAACATACCCACAGAAGAAGTAATCCACATCCTTGTGAGCTCATACAAAACATCTGAAAGGAACCAAGAAGTTCAAAATGAAATAGCTGTACTTTCTATGAAGGACACGGGTTCATTGGATATGAAGAGAAGGAATGCAGGATTCCTTAATCAATGCTTAGTTCTTACGAAAAGATCGTTCGTTAACATGTATCGTGATCTAGGCTATTACTGGTTACGCCTTGTCATATATATTGCATTGGCTATTTCTTTAGCCACTGATCGAGGTTCGCTTATTGCATTTATAAATGGATTCCTCACTTTCATGACCATTGGTGGATTCCCTTCCTTTGTAGAAGTCATGAAGGTATTTCAACGAGAAAGACAAAACGGGCATTATGGTGTGAGTGCATTTGTAATTGGGAACACCTTGTCATGTATCCCATACTTGGTACTGGTTACAGTAATTCCTGGGGCTATATCTTATTACCTTCCCGGACTGCAGCATGGATGCGAGCACTTTCTGTATTTCATTTGTGTTTTATTTTCTAGTCTCATGTTAGTGGAGAGCCTTATGATGATAGTGGCGAGTGTGGTTCCTAACTATCTAATGGGCATAATAACTGGTGCTGGAATTCAAGGACTCATGCTTTTACTTGGTGGGTTTTTTAAATTGCCAAATGATATTCCTAAGCCTGTTTGGAAATACCCAATACACTTTGTTGCTTTTCACACGTTTGCCGACCAAGGAATGTTCAAGAACGAGTTTGAAGGACTAAGATTTGCCACCAATGATGTTGGAGGAGACTCACACAGTTTCATAAGTGGTGAACAGGCTTTAAGAAATACATGGCAAGTTGACATGAGTTACTCAAAGTGGGTTGATCTTGCAATCTTGGTAGGGATGATTGTTCTGTATCGAGTTTTATTTTTTATTATCATCAAGATTAAAGAGAAGATGAAGCCCGTTGCTGTATCACTATCATGCATGTCAATATCTTCCAAGCGAACTGTGCAGGTCATAGAAAACCCCAATGCCACTCCTTTACAT 2033 0.4033 MGSIDDESCVYETSKPSSKSIPQQRVIDIDNETMTLEMETFRRERKMNEKGEGGEMGICLTWKDVWVNASNRKGGSKSLLQSLTGYAKPGQLLAIMGPSGCGKSTLLDTLAGRLGSNTSRTGEILINGHKQVLAYGTSAYVTQDDTLVTTLTVRETVHYSAQLQLPDTMSKEEKRERADLTIREMGLQDAINTRIGGWGSKGISGGQKRRVSICIEILTRPKLLFLDEPTSGLDSAASYYVMKRIAALAQNGHIQRTVIASIHQPSSEVFQLFNNLCLLSAGKTVYFGPASAASEFFASSGFPCPPFMNSSDHLLKTINKDFDQDIEVGLTGSKNIPTEEVIHILVSSYKTSERNQEVQNEIAVLSMKDTGSLDMKRRNAGFLNQCLVLTKRSFVNMYRDLGYYWLRLVIYIALAISLATDRGSLIAFINGFLTFMTIGGFPSFVEVMKVFQRERQNGHYGVSAFVIGNTLSCIPYLVLVTVIPGAISYYLPGLQHGCEHFLYFICVLFSSLMLVESLMMIVASVVPNYLMGIITGAGIQGLMLLLGGFFKLPNDIPKPVWKYPIHFVAFHTFADQGMFKNEFEGLRFATNDVGGDSHSFISGEQALRNTWQVDMSYSKWVDLAILVGMIVLYRVLFFIIIKIKEKMKPVAVSLSCMSISSKRTVQVIENPNATPLH 677
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03377 677 Gene3D - 59 300 IPR027417 -
Pste3g03377 677 SMART AAA_5 89 278 IPR003593 GO:0016887
Pste3g03377 677 MobiDBLite consensus disorder prediction 1 22 - -
Pste3g03377 677 Pfam ABC transporter 81 231 IPR003439 GO:0005524
Pste3g03377 677 Pfam ABC-2 type transporter 263 368 IPR043926 GO:0140359
Pste3g03377 677 Pfam ABC-2 type transporter 385 583 IPR013525 GO:0016020|GO:0140359
Pste3g03377 677 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 65 295 IPR027417 -
Pste3g03377 677 CDD ABCG_EPDR 57 288 - -
Pste3g03377 677 FunFam ABC transporter G family member 11 58 348 - -
Pste3g03377 677 ProSitePatterns ABC transporters family signature. 203 217 IPR017871 GO:0005524|GO:0016887
Pste3g03377 677 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 60 306 IPR003439 GO:0005524
Pste3g03377 677 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 50 655 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pste3g03377 Pste-Chr3 26571903 26577068 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03377 79 245 Calmodulin-binding Proteins AT2G36910 28.902 2.86e-10 62.0