Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03371 AGAAAATAGAGTGCAAAGGTTTGGGTGATAAGAGAGTGATGTTGAATTGTTGATGGTGGGAAGTGGGAAATCCAGCGAATGAGTAGAAGAAATGAGAGGAATAACAAGCCTCACTCTCACTGCAAACTTGTTCCTTTGTTGTGCTGGAAGTGGCAGTTTTCGCACACACCTTCCTTTGTCTTTGGGATCTCTTCTTCGACCAGCTTATTGTAAAATTGATTTGAACCACCAAAACAAAGAAAGAATCATGGTTGTGAGAGCAAGTGGCAGCGACTCTCCCTATCAAGTTTTGGGCGTCTCTCCATCCGCTTCTGTCAATCAAATCAAGAAGGCCTATCGAAAACTTGCTCTCAAGTATCATCCCGATGTCAATAAAGAGGATAAGGCACAGGAGAAGTTTATGAGGATCAAACATGCATACCATACATTGCTAAATTCTAGTTCCCGCAAAAGATATGATTCTGGAACTCCAGGTTATGATTTTTCTCAAGGAACCCAAAGTAGGAATGCACAAGCTCAAGAAGAATTTTATGGACTAGGTAATTTTTTGAGGGATTGTTTGATACCTGCCGATTTTGTTATTACAGAGGACTTCTTTAAGGATCTTCAAGAAGAATTCAGGAACTGGGAAGCAAACGCTGCTTCCCAAGGAAAGCCAAAGAGTCTATGGGAGGAATTGGCGGATATAGGAGAAGAATTTGTGGAGTTCCTTGAGAAAGAACTCAATATAACAGATCAAAATGACAATGATAAAACACCTCCAGGAGGAAATGCATCCAATTTTTCAGGGCCAGAGACACCAAGCAATAGTAGTCAAGGTGAAGCTAGCAAAGGAAACAGAAGCGTTGAGGATAACCTTGATGACATAGAAGCTACTCTGGCTCGGTTGAAAAAGGAATTAGGCTTGTAGCATAAAAGGATAGGTTCCTCCAGTTGGTTGAGAGCAAAAGCCAGACTTCATTGCCTCTCATTCTTGGCGAAAGACATAAGCTATGTGAAGGCATATTTCTTGGTGGCCATTGGGAACTTGCAGTCACCAAATTGATTCTGTAACACCATGGTTTCAATTATTTTAATAATTTAGGTGTTGGTTGGGTGGGTAGAGGAAATACAGCAACACTAAAACTTCAATCATGGATGTATTCGGTGAGATGAAACCGGGAGAAATGTAAAGGGATTATAATTTATTTGATTTATAAAACATTTTATGCGGGAACTCGAACTTGCAACAAGGACAAATTATTTTGATTTCTATGTACATTTATAAACCGAGAGAAATGTAATGAGTCCACTTCGCGAA 1300 0.3992 MRGITSLTLTANLFLCCAGSGSFRTHLPLSLGSLLRPAYCKIDLNHQNKERIMVVRASGSDSPYQVLGVSPSASVNQIKKAYRKLALKYHPDVNKEDKAQEKFMRIKHAYHTLLNSSSRKRYDSGTPGYDFSQGTQSRNAQAQEEFYGLGNFLRDCLIPADFVITEDFFKDLQEEFRNWEANAASQGKPKSLWEELADIGEEFVEFLEKELNITDQNDNDKTPPGGNASNFSGPETPSNSSQGEASKGNRSVEDNLDDIEATLARLKKELGL 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03371 272 Pfam DnaJ domain 63 123 IPR001623 -
Pste3g03371 272 Gene3D DnaJ domain 60 187 IPR036869 -
Pste3g03371 272 CDD DnaJ 63 115 IPR001623 -
Pste3g03371 272 Coils Coil 249 269 - -
Pste3g03371 272 SUPERFAMILY Chaperone J-domain 60 152 IPR036869 -
Pste3g03371 272 PRINTS DnaJ domain signature 82 97 IPR001623 -
Pste3g03371 272 PRINTS DnaJ domain signature 98 118 IPR001623 -
Pste3g03371 272 PRINTS DnaJ domain signature 64 82 IPR001623 -
Pste3g03371 272 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 38 218 - -
Pste3g03371 272 SMART dnaj_3 61 118 IPR001623 -
Pste3g03371 272 MobiDBLite consensus disorder prediction 217 249 - -
Pste3g03371 272 MobiDBLite consensus disorder prediction 214 257 - -
Pste3g03371 272 ProSiteProfiles dnaJ domain profile. 62 126 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03371 Pste-Chr3 26520194 26523098 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03371 64 124 C2H2 Transcription Factor Family AT1G74250 38.806 4.46e-07 48.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03371 3 26520194 26523098 Pste3g03371 3 26520194 26523098 ECH