Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03369 CAAAAATTCAGAGATTTCAAGTGAAGATCTAGCAGGAGCAAGAGAAAGCGAATTAATATTGAGATTATAGCAAAACGGAAACGAGGAAAAAAGGGTTACGTACACCAGAGAAATTAAGAAGGGCACTCGAATTAGCTTATTGCGAAATGGCTTCGCTTCTTGTTCCTTCTAATTCACATGCTCCCAGTGATTATGAAATTAAACTAAACTCAAAGGTTGAGGCCACAACACTGGAGATAGAAGAAGCACATAGTGATAGAGCTCCAAAACCAAAAGGGACCGAAAGAGGAGACACTTCAGGTTGGAATAATGAGAGAGAAGACATAGGTATGTGCTTGACTTGGAAGGATGTATGGGTGACTGCTTCTGTTGGAAAGAATGGAAGCAAAACTATTCTTGAGGGTCTTACTGGTTATGCCAAGCCAGGCCAACTCTTGGCCATAATGGGTCCTTCTGGTTGTGGAAAGTCTACACTTCTTGATGCCTTAGCAGGGAGATTAGGTTCCGACATAAGACAAACCGGGGAGATTCTGATCAATGGCAAGAAACAAGGACTGGCTTATGGAACCTCAGCATATGTCACACAAGATGATACCTTACTGACAACCTTAACGGTTGGAGAAGCAGTGCACTATTCAGCTCAACTCCAATTACCTGACACCATGTCAAGGAAAGAGAAGAAAGAAAGAGCTGACTTTACAATCAGAGAAATGGGTCTTCAAGATGCCATTAACACTAGAATTGGAGGTTGGGGTGTTAAGGGAATTAGTGGGGGTCAGAAGAGGAGAGTGAGCATTTGTATTGAGATTCTAACACGCCCTAAACTTCTCTTCCTTGATGAACCAACTAGTGGACTTGATAGTGCAGCTTCCTATTATGTCATGAAAAGAATAGCTACCCTTGATAAAAAAGATGACATTCGCAGAACCATTATTGCCTCAATCCACCAACCCAGTAGTGAAGTTTTTCAACTTTTCAACAACCTTTGTCTTTTGTCTTCCGGTAGAACTGTTTACTTTGGACCCGCTTCTGCTGCAAAAGAGTTTTTCGCTTCAAATGGTTTCCCTTGTCCTCCTCTCATGAATCCATCAGACCATTTACTGAAAACCATAAACAAGGATTTCGAGCAGGACATTGAGTTGAATTTACAAGGGACTGAAACAATACCCACCGAAGAAGCAATTCGAATCCTTGTAAATTCATACAAGTCATCTGAAATGAATCAAGAAGTTCATAAAGAAGTAGCAGCACTAACTGAAAAGGACACATGTTCAACAAACAAGAAGAGAAAGCATGCTGGCTTCCTTAATCAGTGCATTGCTCTTACTAAAAGATCGACCATTAACATGTATCGTGATCTAGGCTATTACTGGTTACGTCTTGCTATATATGTAGCATTGGCTATAAGTTTAGCCACTATTTTCTATGATCTGGGTACTAGTTATCGCTCAATTCTGGATAGAGGTTCATTTCTTATGTTTGTATCTTCATTCATCACCTTCATGACCATTGGCGGATTCCCTTCCTTTGTGGAGGATATGAAGGTGTTTGAACGTGAAAGACTTAATGGGCATTATAGTGTCACTGCATTTGTGATTGGGAACACCTTTTCATCAATCCCATACTTGTTGTTGGTTTCACTCATTCCTGGAGCTATAGCCTATTTCCTTCCTGGCCTTCAGAAAGACTTTGAGCACTTTGCATACTTCATTTGTAGTCTCTTTGCATGTCTGATGTTAGTAGAGAGCCTTATGATGATAGTTGCAAGCATTGTCCCCAACTTTCTAATGGGTATCATAACCGGTGCTGGAATTCAAGGAATGATGATTATAAGTGGCGGCTTCTTTAGGTTGCCGAATGATCTTCCTAAGCCATTTTGGAAATACCCTATGTTCTATGTTGCTTTCCACAGATACGCATACCAAGGAATGTTCAAAAATGAGTTTCAAGGACTAATATTTGCTTCAAATAATCCTAATGGGGGCTACATTACCGGTGAAGAGATTCTAAGAGATACATGGCAAGTGAACATGAGTTACTCCAAATGGGTTGATCTTGGAGTCTTGCTGGGGATGATTGTTTTGTATAGAGTTCTCTTTTTGGTTAACATCAAAACCATTGAGAAGCTAAAACCCATCATTTTATCATTCCTGTCATCACCAGCGAATTCCAAGCGAACAATACAGATCACGCAAAATCCCAATGCCACTCCTTTACAACAAGTTCAAGTTGTGTAAGATTCATGAAGAATTAGGTTCAAGGCATGTAGGGACAAAACGTCATTTCAATTTTCATATAAAAAATTTCATAGCCTTTCTTTAATAAAATTTCTTAGCTTATAAAAAAATCTATTTTCTATACAATGTCTTATGATAAGATATATGTAGGGATGACAAAAACACTCATACCCTTTGAGACCGTCCCGAACCACCTCGATTTTGACTGTATATGGGTACGAGTACATGTATTACCTTATGTAATGAATTAGGTATAGGTACGGGTATAGGGGATTGAAATTCCGTGTCCTAAATTGATGTCTC 2540 0.3945 MASLLVPSNSHAPSDYEIKLNSKVEATTLEIEEAHSDRAPKPKGTERGDTSGWNNEREDIGMCLTWKDVWVTASVGKNGSKTILEGLTGYAKPGQLLAIMGPSGCGKSTLLDALAGRLGSDIRQTGEILINGKKQGLAYGTSAYVTQDDTLLTTLTVGEAVHYSAQLQLPDTMSRKEKKERADFTIREMGLQDAINTRIGGWGVKGISGGQKRRVSICIEILTRPKLLFLDEPTSGLDSAASYYVMKRIATLDKKDDIRRTIIASIHQPSSEVFQLFNNLCLLSSGRTVYFGPASAAKEFFASNGFPCPPLMNPSDHLLKTINKDFEQDIELNLQGTETIPTEEAIRILVNSYKSSEMNQEVHKEVAALTEKDTCSTNKKRKHAGFLNQCIALTKRSTINMYRDLGYYWLRLAIYVALAISLATIFYDLGTSYRSILDRGSFLMFVSSFITFMTIGGFPSFVEDMKVFERERLNGHYSVTAFVIGNTFSSIPYLLLVSLIPGAIAYFLPGLQKDFEHFAYFICSLFACLMLVESLMMIVASIVPNFLMGIITGAGIQGMMIISGGFFRLPNDLPKPFWKYPMFYVAFHRYAYQGMFKNEFQGLIFASNNPNGGYITGEEILRDTWQVNMSYSKWVDLGVLLGMIVLYRVLFLVNIKTIEKLKPIILSFLSSPANSKRTIQITQNPNATPLQQVQVV 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03369 696 Pfam ABC-2 type transporter 389 600 IPR013525 GO:0016020|GO:0140359
Pste3g03369 696 MobiDBLite consensus disorder prediction 32 54 - -
Pste3g03369 696 SMART AAA_5 93 287 IPR003593 GO:0016887
Pste3g03369 696 ProSitePatterns ABC transporters family signature. 207 221 IPR017871 GO:0005524|GO:0016887
Pste3g03369 696 Pfam ABC-2 type transporter 267 384 IPR043926 GO:0140359
Pste3g03369 696 Pfam ABC transporter 86 235 IPR003439 GO:0005524
Pste3g03369 696 Gene3D - 53 305 IPR027417 -
Pste3g03369 696 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 64 310 IPR003439 GO:0005524
Pste3g03369 696 FunFam ABC transporter G family member 11 62 352 - -
Pste3g03369 696 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 301 IPR027417 -
Pste3g03369 696 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 55 671 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03369 Pste-Chr3 26514865 26527046 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03369 83 265 Calmodulin-binding Proteins AT2G36910 29.787 3.52e-10 61.6