Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03358 GGCTATGAGTATGATGAATCAAACCAGTGGGATCTCAACGGACACTACACCAACTTTGTCACCGATCATCTTTTTAACCAATCCCATGTGGAACCGTTTGTTCCATCCTCGGACATGGACATGGACACGGCCACGGCCACGGCCACGGCCACAGTCACGGTGAGGGATCCTTCACTTGAAGAAGACACTGATTTTTCTGAAACCTTCAAGTTCATTAGTCAAATTCTTTTGGAAGAGAACTTTGAACAGAAACCTTGTATGTGTTATGACCCTTTGAGTTTGCAACACACTGAGAAATCATTCTATGAGGCTTTGGAATTGGAAGCACCACTGTCTCTGTCCCCTGATCAGCACCCGCTTGAGAGCCCCGATGGCAATTCCACCACTGATTCAGCCAATTTTCACGAGTTGAAACCTTGTTCACCTAAAACACCTGTTTCTGGTGGCGGCGGTGATGCTTTAGATTCCTCTTCCCACACGCCCCCTTTGGTTGTTCTGACTAAAATTAATGATGGGACGTTGGATTTGGATTCTTCTGTAACCAAGCTCTTGGCTGAAAATATCTTCAGTGACGCGGACTCTATGTTGCAGTTCAAAAGAGGATTGGAGGAGGCTAGTAAGTTTCTTCCCCAGAGGCCTCAGCTTTATACTGGGTTTGAGAGCACCACAGTGTCTGCTGGCGTAGCAGTGCAGATGGATAATACATTTGGGGTGAAGAGTAGAAAAAATCACGCCCGCCAACATGAAGAAGAAGGAAGAAGCAACAAGCAGTCTGCCGTTTGTGTTGAGGTTGAGGAGGAGACTGAAATATCCGAAATATATGACAAGGTGTTGCTTAGTGTTGAAAATGTGCCGCTATGTGCTGGGAAAAATGGATTAGTGGCAGTGGGAGATGATAGCACAAAGCTAAGTGAGCAACCCAATTCATCTGATGGTGGGAAGGTTCGTTCCAAGAGGCAAGGGAGCAAGAAGGAAACCGTGGATCTTAGGACCCTTTCTATTCTGTGTGCACAAGCTGTATCTGCCAGTGACAACAGGACTGCTAATGAACTGCTGAAACAGATTAGGCAGCATTCTTCCACCATAGGTGATGCCTCACAGCGTTTGGCCCATTATGTAGCCAATGCTTTGGAAGCTCGCTTGGTTGGTGCTGGAACTGCAACACAAATATTTTATATGAGCTACAAGAATTTCACTACTACTGATTTCCTCAATGCTTACCAAGTTTTCATATCTGCCTGCCCTTTCAAGAAATTTGCACATTTCTTTGCAAATAAGATGATTATGAAAACAGCTGAGAAGGCAGAAACACTTCATATTATTGATTTTGGTATCCTCTATGGTTTTCAGTGGCCAATTCTCATCAAGTTTTTAGCAAGAAGACATGGAGGGCCACCTAAGCTGCGCATCACTGGAATAGAGTATCCCCAACCTGGATTTCGTCCGTCTGAAAGAATTGAGGAGACTGGTCGTCGTCTAGCTAAGTATTGCAAGCGGTTCAAGGTTCCCTTTGATTACAAGGCCATACCATCACGGAATTGGGAGACCATTCAAATTGAAGACCTAAAGATTGAGAGAAATGAGGTGCTTGCTGTGAACTGTCTGGTAAGGTTCAAGAATTTACTTGATGAGTCGATTGAAGTGAATAGTCCCAGAAATGCTGTTTTGAATTTAATCAGGAAGATGAATCCAGATATTTTTGTTCACTCTGTTGTAAATGGATCCTATAATGCCCCTTTCTTTGTCACGCGCTTCAGGGAGGCACTGTTCCATTATTCTTCAATTTATGATATGTTTGATACTCTAATATCCCGTGAAAATGAATGGAGGTTGCTGCTTGAAAGAGAATTTTTGGGTCGGGAGATAATGAATGTTGTAGCATGTGAAGCTCTTGAGAGGGTTGAGAGGCCTGAGTCATACAAACAATGGCAGGCTAGGAATACAAGAGCTGGTTTTAGGCAGCTCCCACTGGATAAGGAGATAATGGCCAAATTTAGGAGCAAGTTAAGGGAATGGTACCACAGGGATTTTGTCTTTGATGAAGATGGCCATTGGATGCTTCAAGGTTGGAAGGGTCGCATTCTCATAATTGATATGTCACTCAACTCTAGTTTCAGAATTAATTCTGGATTGAAGGTAACCTTCAACTGTTGTGATGTGAACTGTGATATATATTCTTCCCATCTTTTCTCCTAGTGATCCTGTTTAGTGGCAGAATTTATTCCCAGATTAGCATCAAATCATACAATGATAAGAACATAATATTAGTAGTTAAAATGTGCTTTTATTTACAATGTTTTTCTTTTCTCTCTCTGACTGGCATGTATTACAGGCAGTTAGGCACTTTTGAGCTTAAAAATAAATTGGTAGAAATTCTTTTCAGGATATGTTGTGTCGTCAACTAGC 2406 0.4252 GYEYDESNQWDLNGHYTNFVTDHLFNQSHVEPFVPSSDMDMDTATATATATVTVRDPSLEEDTDFSETFKFISQILLEENFEQKPCMCYDPLSLQHTEKSFYEALELEAPLSLSPDQHPLESPDGNSTTDSANFHELKPCSPKTPVSGGGGDALDSSSHTPPLVVLTKINDGTLDLDSSVTKLLAENIFSDADSMLQFKRGLEEASKFLPQRPQLYTGFESTTVSAGVAVQMDNTFGVKSRKNHARQHEEEGRSNKQSAVCVEVEEETEISEIYDKVLLSVENVPLCAGKNGLVAVGDDSTKLSEQPNSSDGGKVRSKRQGSKKETVDLRTLSILCAQAVSASDNRTANELLKQIRQHSSTIGDASQRLAHYVANALEARLVGAGTATQIFYMSYKNFTTTDFLNAYQVFISACPFKKFAHFFANKMIMKTAEKAETLHIIDFGILYGFQWPILIKFLARRHGGPPKLRITGIEYPQPGFRPSERIEETGRRLAKYCKRFKVPFDYKAIPSRNWETIQIEDLKIERNEVLAVNCLVRFKNLLDESIEVNSPRNAVLNLIRKMNPDIFVHSVVNGSYNAPFFVTRFREALFHYSSIYDMFDTLISRENEWRLLLEREFLGREIMNVVACEALERVERPESYKQWQARNTRAGFRQLPLDKEIMAKFRSKLREWYHRDFVFDEDGHWMLQGWKGRILIIDMSLNSSFRINSGLKVTFNCCDVNCDIYSSHLFS 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03358 731 MobiDBLite consensus disorder prediction 301 315 - -
Pste3g03358 731 ProSiteProfiles GRAS family profile. 320 702 IPR005202 -
Pste3g03358 731 MobiDBLite consensus disorder prediction 113 159 - -
Pste3g03358 731 Pfam GRAS domain family 334 696 IPR005202 -
Pste3g03358 731 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 265 692 IPR005202 -
Pste3g03358 731 MobiDBLite consensus disorder prediction 298 324 - -
Pste3g03358 731 MobiDBLite consensus disorder prediction 119 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03358 Pste-Chr3 26406788 26409323 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03358 68 695 GRAS Transcription Factor Family AT1G07530 47.598 0.0 594
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pste3g03358 GRAS 1.2e-109 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02283 1 7789086 7791173 Pste3g03358 3 26406788 26409323 PCT