Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03350 ATGGGAGTTTGTTTGAGCGCGGAAATTAAAATTAAAGCGGAAAGCCCATATAACACTGGGTTGAATTCAAAGGAGGGAAATGATGTCTGCAGCAGCAACGGTAAGGTTTCAGCAATCTCAGTGGGTGGGAGTCGGAGTGAGGGTGAGATCTTGCACTCCTCGAATTTAAAGAGCTTTACCTTATCAGAGCTTAAGACGGCCACTAGAAATTTCCGTCCTGACAGTGTGTTAGGAGAAGGTGGTTTTGGATCAGTTTTTAAGGGATGGATCGATCAGAATTCATTCACTGCTACCAAACCTGGCACTGGCATTGTTATTGCTGTCAAAAGACTCAATCAAGATGCCATCCAGGGTCACAGGGAGTGGTTGGCTGAAGTCAACTATCTTGGACAGCTTTCTCATCCTCATCTAGTCAGATTGATTGGATTTTGCCTTGAAGATCAACACCGCCTTCTCGTCTACGAATTCATGCCTCGTGGAAGCTTGGAAAACCATTTGTTCAGGAGAGGCTCATATTTTCAACCCCTTTCTTGGAGCCTCCGTTTAAAGGTTGCTCTTGATGCTGCCAAAGGGCTTGCATTTCTTCATAGTGCCCAAACTAAAGTCATATATAGAGATTTTAAGACTTCAAATGTCTTGTTGGATTCAAATTACAATGCAAAACTTTCTGATTTTGGGCTAGCCAAGGATGGACCAACTGGTGACAAAAGTCATGTCTCCACCAGAGTAATGGGAACCTATGGATATGCGGCTCCTGAATATCTAGCTACAGGTCATCTTACTGCTAAGAGCGATGTCTATAGTTTTGGAGTCGTCCTACTAGAAATGTTATCTGGCAAGAGAGCAGTTGACAAGAATAGACCATCTGGACAACACAATTTGGTTGAATGGGCTAAACCTTACCTGGGAAGCAAACGTAAAATTTTCCGTGTGTTGGACACTCGGCTTGAAGGCCAATATTCAACAGATGATGCGTTTAAGGTAGCCACCCTTGCCTTGCGGTGCCTATCAATAGAATCCAAGTTCAGGCCAAACATGGATGAAGTGGTTACAACATTGGAACAGCTGCAGGTTCCTAATGTAAATGGAGATAATCAAAGTCCTTCTGTTAATGGGCCTCGTGTTCGAAGAAGAAGTGCTGATGTAAATAGATGCTATCAAAATCCTTCTGTTAATGGATCTCGAGTTCGTAGAAGAAGTGCTGATGATATTAGCCGTGTGGATACTCCCACAGCTTATCCTAGGCCCTCTGCATCCCCTCTCTATACTTGACAGACAAACACTTAACTTGATGCATCTTTTGCTGGTAATTTCATCCATCAGCTCAGACACTTGCGTGTACATATCATATATTTCACGTAATATATTACCATCTCTTGGCAATTGATAGTATAGTACACCATTAATATTGTACGTATTCTTAGTTCCGTATATTAGATGGGAAGGCAGGTACATATGTATGATACCTTTGGTCAGCACTAAGCACATTTTTGTTGTCTATATTAGGGTGGTGTCGTCTCCTAGTCTATTCTATAACACCTCGTTGCCATCACCAACTTCTATATTCAACATACGAAATACATTTGAAGTCCTGTGCTCTATTCTATTAGCTCGG 1615 0.4217 MGVCLSAEIKIKAESPYNTGLNSKEGNDVCSSNGKVSAISVGGSRSEGEILHSSNLKSFTLSELKTATRNFRPDSVLGEGGFGSVFKGWIDQNSFTATKPGTGIVIAVKRLNQDAIQGHREWLAEVNYLGQLSHPHLVRLIGFCLEDQHRLLVYEFMPRGSLENHLFRRGSYFQPLSWSLRLKVALDAAKGLAFLHSAQTKVIYRDFKTSNVLLDSNYNAKLSDFGLAKDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGKRAVDKNRPSGQHNLVEWAKPYLGSKRKIFRVLDTRLEGQYSTDDAFKVATLALRCLSIESKFRPNMDEVVTTLEQLQVPNVNGDNQSPSVNGPRVRRRSADVNRCYQNPSVNGSRVRRRSADDISRVDTPTAYPRPSASPLYT 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03350 423 MobiDBLite consensus disorder prediction 357 373 - -
Pste3g03350 423 FunFam Serine/threonine-protein kinase BIK1 39 156 - -
Pste3g03350 423 Gene3D Transferase(Phosphotransferase) domain 1 157 370 - -
Pste3g03350 423 PANTHER OS01G0588500 PROTEIN-RELATED 38 357 - -
Pste3g03350 423 SUPERFAMILY Protein kinase-like (PK-like) 48 353 IPR011009 -
Pste3g03350 423 ProSitePatterns Protein kinases ATP-binding region signature. 77 109 IPR017441 GO:0005524
Pste3g03350 423 Gene3D Phosphorylase Kinase; domain 1 46 156 - -
Pste3g03350 423 CDD STKc_IRAK 77 356 - -
Pste3g03350 423 ProSiteProfiles Protein kinase domain profile. 71 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03350 423 MobiDBLite consensus disorder prediction 357 423 - -
Pste3g03350 423 Pfam Protein tyrosine and serine/threonine kinase 75 353 IPR001245 GO:0004672|GO:0006468
Pste3g03350 423 FunFam Probable serine/threonine-protein kinase PBL8 157 371 - -
Pste3g03350 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03350 Pste-Chr3 26270431 26272457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03350 18 353 Glycoside Hydrolase AT3G07070 45.994 4.11e-103 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pste3g03350 PK_Tyr_Ser-Thr 1.2e-46 CL0016