Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03317 ATGGAGAAGACTCTTCAAGAATATTCTACAAATGAAATTTCGCACTTTTGCCAAGTTTCAAAGGGTTCAAGTGTTGAAAATGGAGTGGAAATTGCAGTTGATAAGGAAAATATGGAAATTGCTTTTAAGAATAACATTGACTTGCATTTAAGAAAGAGTGGCAGATCAATCGCAAAGCAGAAGACTGTTGACAATGTTTTCGGAATTGTTAACAAATGGGGTTGGTGCAAGAAAAATCTTGGAGCAAATGCCATAGAGGCAGTCTCTCTCGCAGTTTACAAAGCTGGTGTTAGTGTCCTGAAAATTCCTATTTACAAGCATATTGTAAATCTTGTGGGAAACAAACTTGCTATGCAGATGTTTGTAGTTCTTCCTGTGGGAGCTTCCTCTTTCAAGGGGACTAGGAAGATGGGTGTAGAAGCATATCACAATTTGAAGTCTGTGATTAAGAAGAAATATGGTCAAGATGGAGTAAATGATGTGATGAAGGCGACTTTGCCCATAACATTCAGGAAAACAAGGAAGGACAAGGTTGATTTTAATGGGGTTCCCGAGTGCATTGGCAAGCTAGCACAGGCAGGAATTGAACTATGGATTCTGACTGGTGATAAAATGGAGACTATCGAGGACTTTCTTAATCCAGCAAATGATACTATTCCAATAGTGGAAGACCTTAAAAGTGGGGAAGCTAATCGAGTTGCTGCTAACAAGAAATTGAATATTGAATCTTCTCGTAATCAGGGTATTCTGACGGTTCATATTGAGAGGTATATCTTGGAAAATGAAGATATTGTGTCTAGTCAAAATGGCGATGCCTCTCATTTAACTAAATCTTCAAAACCACTTGTTCGGAAGAGGAAGTTTGTTGTGGTAGACTTGGCAGGTTCAGAACGTAAAAAACCAGCAGTGTATTTTGATGTTGTGAACATTGCAAAAGCAACTAGGGGTTCTAAGGAAGTCAACATTTCGAAAGTCAGATATGACATTGAGCTGTTAACAAAGCAGTGTGATGAAACATTCAATCTTTACCTAATTGTAAAACATGCGGATGGAAAGCTCAGAATCAATTGCACCTCCGATGGAGTTCCATTCCAAGAGGCTTTTTGTAATTGCAACCTCTCATGTGTTGATTACCTAGATGGCGAGGACATTGAAATGGCAACACAGTTTGGGGTCGATTTTCCTTCTGAAGATGAATATGGAAACCAATACCCTATGGCTTTCAAGTTGACCAAATTCTTGTGTGGGGGTTTCACGTTTGCATGGCGCTTCAACCACTCTCTTTTTGATGGGACTGGAATAACACAGTTCTTGGTCTCGGTGGCAGAACTTGCAGGTGGAGAAAGTGAGCCATCTCTGAAACCTGTGTGGGAAAGAGAGACTCTGGTGGGCAAAATCACTAGTGAACCCATGAAAAATCCCATGGAAAATGCCAATGTTGCAGTTTCACCATTGCTGCCAACCGCGAAGTATGTGCATGCATGCTTTAAGGTGGATAAAGAGAGCATAGCAAGACTGAAGACGAATTTGATGGAAAACGTGGACCTAAATACCATGTTTATGAAGAAAGGGTTCACCACATTTGAGTGCTTGGCTGCATACATTTGGAGGGCAAGAGCAAGAGCCTTGAAACTCAATGATGATGGGGAAACTATGCTCAATATCACGCTAGGTGTGAGGGCACTGTTGGACGATCCTTTGCCCACTGGATATTATGGCAATGCCATCGTGGAATCATATGTTAAGTTAGCAGCGAAGGAACTCATGGAACAGCCACTCTTGGAGGTTGTGAAACACATCAGACAGAGCTTAATATCCTGTCTTAACAATGATTATTGCATAAATTTCATTGACACTATAGAGACAAAACCAATGCGGTTTGATTACGAAAGTGGTGCGATAACCATTTTGACGGATTGGAGACATTTGGGTTCTTTGGACAAGATTGATTTTGGATGGAAGGAGCCAATAAATATGATTCCAATCCCAAGTGAGGTGAGTGGACCATCAGGTATGTATGATATCCTGCCTCCCAGTAAAGTTGATCCATCAATGACTGGAGGAGTAAGGTTTTTCATATCCCTACCTAGTGCAGCCATGTTCACCTTCAAGGAAGAGATGAAACTTCTTACCAGTAACAATCCAAAACTCAACCTCTAA 2160 0.4079 MEKTLQEYSTNEISHFCQVSKGSSVENGVEIAVDKENMEIAFKNNIDLHLRKSGRSIAKQKTVDNVFGIVNKWGWCKKNLGANAIEAVSLAVYKAGVSVLKIPIYKHIVNLVGNKLAMQMFVVLPVGASSFKGTRKMGVEAYHNLKSVIKKKYGQDGVNDVMKATLPITFRKTRKDKVDFNGVPECIGKLAQAGIELWILTGDKMETIEDFLNPANDTIPIVEDLKSGEANRVAANKKLNIESSRNQGILTVHIERYILENEDIVSSQNGDASHLTKSSKPLVRKRKFVVVDLAGSERKKPAVYFDVVNIAKATRGSKEVNISKVRYDIELLTKQCDETFNLYLIVKHADGKLRINCTSDGVPFQEAFCNCNLSCVDYLDGEDIEMATQFGVDFPSEDEYGNQYPMAFKLTKFLCGGFTFAWRFNHSLFDGTGITQFLVSVAELAGGESEPSLKPVWERETLVGKITSEPMKNPMENANVAVSPLLPTAKYVHACFKVDKESIARLKTNLMENVDLNTMFMKKGFTTFECLAAYIWRARARALKLNDDGETMLNITLGVRALLDDPLPTGYYGNAIVESYVKLAAKELMEQPLLEVVKHIRQSLISCLNNDYCINFIDTIETKPMRFDYESGAITILTDWRHLGSLDKIDFGWKEPINMIPIPSEVSGPSGMYDILPPSKVDPSMTGGVRFFISLPSAAMFTFKEEMKLLTSNNPKLNL 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03317 719 PANTHER ACYL TRANSFERASE 4 346 708 - -
Pste3g03317 719 SMART Enolase_N_3 4 108 IPR020811 -
Pste3g03317 719 Gene3D Kinesin motor domain 213 320 IPR036961 -
Pste3g03317 719 Pfam Transferase family 347 709 - -
Pste3g03317 719 Gene3D - 9 99 IPR029017 -
Pste3g03317 719 Gene3D - 321 474 IPR023213 -
Pste3g03317 719 Gene3D - 100 180 IPR036849 -
Pste3g03317 719 Pfam Enolase, C-terminal TIM barrel domain 112 158 IPR020810 -
Pste3g03317 719 SUPERFAMILY Enolase C-terminal domain-like 113 159 IPR036849 -
Pste3g03317 719 Gene3D - 479 707 IPR023213 -
Pste3g03317 719 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 205 298 IPR027417 -
Pste3g03317 719 SUPERFAMILY Enolase N-terminal domain-like 44 115 IPR029017 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03317 Pste-Chr3 25893207 25897407 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03317 291 705 Monolignol Biosynthesis Gene Families AT5G48930 26.328 1.69e-21 96.3