Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03316 GTGGGAGAAAGAGAGAAGAGAGAAGTGAGAGAAGTGAAGAGTGTTATGAAAATGGTTGAACAGGAAGTGCGTAAAGGTCCGTGGACAGAAGAAGAAGACTTAAAATTGGTGTCGTTTGTTGGCTTGTTTGGAGACCGTAGATGGGACTTTATTGCTAAGGTATCAGGTTTGAATAGAACAGGTAAGAGTTGCAGACTACGGTGGGTTAATTACCTTCATCCTGGTCTCAAACGAGGAAAGATGACATCCCAGGAAGAGCGCCTTATCTTGGAGCTTCACTCCAAATGGGGAAATAGGTGGTCAAGAATTGCGCGCAAGTTACCAGGGCGCACTGACAATGAGATTAAGAATTACTGGAGGACTCTGATGAGGAAAAAGGCTCAGGAGAAGAAGCGAGCAGAGGCTGCTGTGTCTGCCTCAGCCTCAGCCTCAACCCCTTCTGCTATAATTCATTCCTCCAATAACAAGGTTGGAGGAGAAAGCTTCTATGACACAGGCACAAGCCAAGGTGAACAACCCTGCTTGTTCTCTATGGATGATATATGGAAAGATATTATTGACATGTCCGGAGACAACACACTCTATGATTCCCACACCCAATACTATTCTGACCCTCTATGCCTCATCGATGACCAAACTTTCTTTTGCCCCATGCCTATGCACAAGCCACCCTTTTTTTAACCCACCACCAATATTCTTTTTCCCCTCAATATTATATTTTATTTTCTTCATATACTGTTAGTTACCTACCCGATGCATGTGTGCCACCTAATGTCTAACCTGTATAGCCTTTGCCTTTCATTTATTTTCAAGCACCCTACTGTCAACGCTGAACCAGCTCTAATACTTTCACTCACAACTCTACTCTCTATGTCAATCCTTTCTTTTACTTTCCATCCAATTCCAATACGATACTCGTTTTGCTCTCATCCTTCATCAATGTAAAATATCAACCACTTGTTTGCATCTTACCCTTCTTCTTTTTTCTATCTTTATCGATCTCATCTACACTTCTACCAACATCGGGCCCTTGCATTCATTCTTTATATTTATATTAATTAGTAGTTTAGTACCTACTACCAAGTGCGGCAATCAATATTTAACAACTTTGATGTTGCGTCCGTGCCCAAGACAAACATTTACTAATTGGA 1151 0.4162 VGEREKREVREVKSVMKMVEQEVRKGPWTEEEDLKLVSFVGLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGKMTSQEERLILELHSKWGNRWSRIARKLPGRTDNEIKNYWRTLMRKKAQEKKRAEAAVSASASASTPSAIIHSSNNKVGGESFYDTGTSQGEQPCLFSMDDIWKDIIDMSGDNTLYDSHTQYYSDPLCLIDDQTFFCPMPMHKPPFF 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03316 226 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 73 127 IPR017930 -
Pste3g03316 226 ProSiteProfiles Myb-like domain profile. 20 72 IPR001005 -
Pste3g03316 226 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 20 72 IPR017930 -
Pste3g03316 226 ProSiteProfiles Myb-like domain profile. 73 123 IPR001005 -
Pste3g03316 226 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 19 134 IPR044676 GO:0003700|GO:0006355|GO:0043565
Pste3g03316 226 SMART sant 24 74 IPR001005 -
Pste3g03316 226 SMART sant 77 125 IPR001005 -
Pste3g03316 226 FunFam Myb transcription factor 25 77 - -
Pste3g03316 226 FunFam MYB transcription factor 80 146 - -
Pste3g03316 226 CDD SANT 80 123 IPR001005 -
Pste3g03316 226 CDD SANT 27 72 IPR001005 -
Pste3g03316 226 SUPERFAMILY Homeodomain-like 23 119 IPR009057 -
Pste3g03316 226 Gene3D - 80 147 - -
Pste3g03316 226 Gene3D - 25 77 - -
Pste3g03316 226 Pfam Myb-like DNA-binding domain 25 72 IPR001005 -
Pste3g03316 226 Pfam Myb-like DNA-binding domain 78 122 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03316 Pste-Chr3 25884633 25886003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03316 16 217 MYB Transcription Factor Family AT5G59780 62.319 3.00e-82 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste3g03316 Myb_DNA-binding 7.7e-16 CL0123