Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03302 CATTTGCAGTGTAGCATTTATCTTTATTCACTCCCTTCCTCTTCTTCAGTCACCATGTATCCTCACTCCCTCTCTTCCTCCACTTCCACTTCCACTTCCCCTTCCCCACTCTTCACTCTCACTGAAACCAGTTATCACTGCAATACTCATTGTTCCTCTCCCCACTTCAACTACAATGCCACTTCAACTTCTCCTCCTCTCCAGAGGATTAATGCAATGCATCATTCGGATAGTCCATTATCAACTGAAAGTAGTATGATCGTGCAAGGGATGAGCAGAGCCTGTCGATATAGCCCGGAGGAGAAGAAGCTCAGAATTGAGAGATACAGAAGTAAGAGGAACCAGAGGAACTTCAACAAGAAAATTAAGTATGCTTGCAGGAAGACATTGGCAGACAGCAGGCCGCGCATTAGAGGACGGTTTGCGAGGAATGATGAAATTGACCAGAACACTACAATTCAGTGGAGCCAAAATGGTGCTGCAGAGGAAGAGGATGAGGAAGATGAGAATTGGGTCACTATCTTAGATTCCTTAGTTGCAGCAAATTTTTCTGAGGAGTCTCAAGGCAGTTCCTCCTTTGGTCTGTTCTATTAGAATAATTGCATGTTTGATAACCTAGTTTATTTTCCACGTTCAAACTATTGTGCTGCACTTTTTGTAGCTTTGATCAAAGAAGTAGTGTAATGTATATACAGTTATTTGAGCTATCTATGCA 715 0.4252 HLQCSIYLYSLPSSSSVTMYPHSLSSSTSTSTSPSPLFTLTETSYHCNTHCSSPHFNYNATSTSPPLQRINAMHHSDSPLSTESSMIVQGMSRACRYSPEEKKLRIERYRSKRNQRNFNKKIKYACRKTLADSRPRIRGRFARNDEIDQNTTIQWSQNGAAEEEDEEDENWVTILDSLVAANFSEESQGSSSFGLFY 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03302 197 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 25 163 IPR045281 GO:0009909
Pste3g03302 197 MobiDBLite consensus disorder prediction 16 35 - -
Pste3g03302 197 Pfam CCT motif 104 144 IPR010402 GO:0005515
Pste3g03302 197 ProSiteProfiles CCT domain profile. 102 144 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03302 Pste-Chr3 25627121 25628796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03302 98 149 C2C2-CO-like Transcription Factor Family AT5G15850 48.077 1.60e-12 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pste3g03302 CCT 3.6e-18 CL0281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03302 3 25627121 25628796 Pste3g03302 3 25627121 25628796 ECH
Pste3g03302 3 25627121 25628796 Pste1g02442 1 8818910 8821016 PCT