Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03292 GGCCTGTCCTGGTTATTCACTTGATCACGTCACTGTGTAAAAAGAAGCTGACTGGAAAGAGCGAAAAGCGAAGAAAGTAAGAACGAACGAACGAAAGCAAGGAAAAGTGTGTTGATTGAGATACTGTTACAATCCTTCAACGTTTCCGCGTGGATCTCTCTCTCTGATTCTCCAGTCATCGCCTTCGCCATGGCGGAGCGTGCGTCTTACGGATTAGGACCTCGATTAGATCTTCAGCAATTACAACTTGAAGCCCAGCATAGGTGGTTGCGCCCTGCAGAAATATGTGAAATTCTTCGCAATTATCGGATGTTTCAAATCACATCAGAACCACCTAACAGGCCGCCTAGTGGTTCACTTTTTCTGTTTGATCGGAAGGTTTTAAGGTACTTTAGAAAAGATGGACATAATTGGAGAAAGAAAAAAGATGGAAAGACTGTGGGAAGTGTTGATGTGTTACACTGCTACTATGCCCATGGTGAAGAAAATGAAAATTTTCAGAGGCGAAGCTATTGGATGCTTGAAACGGATATGATGCATATAGTGTTTGTCCACTACTTAGATGTGAAGGTTAACAAAACCAATATCGGTGGGAAAACATATACTGGTGAGGCTACATCAGATTCCCAGAAGAGCAGTTCTTTGTCTTCTGGGTTTCGCAGAAATTATGGTAGTGTGCCTTCAGGAAGTACAGATTCCATGAGCCCAACCAGCACTTTGACATCTTTATGTGAAGATGCTGATTCAGAGGATATTCATCAAGCAAGCTCAGGATTACACTCTTATCATGAATCACAAAATTTGGGGAATGATCGTCAGATGGATAAGATTGATGCTCGATCAAATAGTGATCATGGACAGTTACCAATGTCTGGAACAGAATATATTCCACTTGTTCAGGGGGATAAGTCCAGAGTTAATGATACTACTCAAATTGATGGTCAGAGAGCACATGGCATTGCATCCTGGGACAATGCCGTGGAACAGTCTGCTGGAAGGCATACTGATTCTTCTGTTGTATCATCTACATCCATTCCATCAAGTACGTTGGGAAACAGCCTTGAAGATCATACTGTTCCAGGCAACCTTTTGGGGCATAAAAATACCCACAATGAAGAGGATAGGGTCTCTAAGCCTGTCCAATCAAATTGGCAGATTCCTTTTGAAGACAATATGGGAGAATTGCCGAAGTGGAGCTTTACCCAATCATTGAGTTTGGAATTTGAATCTGATTATGGCGCTAGTTTACTGGGGGATGTAACGAATAATGCAAGTCCAGAAATAGTTCCCGAGCTGTTTGCTCTTAATGGTGAGCCAAAGGCGCAGGTTATGCAGCAAAACTTCTCAAAGCAATATACACAGGCACAATCTCAACCTGCATCGAAATCCAGTTCTGAGTATGAAACTCCAGGTGAAGCAAGTATCAGCTATGCCTTGAACATGAAGCGAGGATTATTGGGTGGAGAGGAGAGCCTAAAGAAGGTTGATAGTTTCTCTAGGTGGATCTCTAAAGAACTTGCGGGCGTGGATGATCTGCAGATGCAGTCTTCCCCTGGTATTTCATGGAGCACAGATGAATGTGGGGATGTGATAGACGATACCTCATTGAACCTGTCCTTGTCTCAAGACCAGCTGTTTAGCATAAATGATTTTTCACCAAAATGGGCTTATGCTGAATCAGAAATTGAGGTATTGATTATTGGAACCTTTTTGAAGAGTGAACCTGAGGTGGCAACATGTAACTGGTCCTGTATGTTTGGGGAAGTGGAGGTTCCTGCTGAGATTTTAGCTAATGGTATTCTATGCTGTCAAGCTCCACCGCATAAGACTGGACGGGTTCCCTTCTATGTAACATGTTCCAATAGGTTTGCATGTAGTGAAGTTCGGGAATTTGAATACAGAGAGGGCTTTGATAGAAACACAGATTTGGCCAATTTTTTTAGCAGTTTAACTGAAATGATGCTTCATTTGCAACTGGTGCGGTTGATTTCTTTAAACTCAGTTCAAAATTCAAAACAAGTGTTTGAGGATGATATGGAGAAACGGAACTTAATTTTCAAGCTTATTTCACTGAAAGAGGAAGAGGAATATTCAAATAAGGAAGAGACAACTATCGAGATGGATATATCAAAGCACAAGTTGAAGCAGGTTAAAGAGAAGTTGTACTCATGGCTTCTTCACAAAGTAACTGAAACTGGTAAAGGGCCTCTTGTATTAGGTGAGGAAGGGCTAGGTGTGTTGCACTTAGTTGCTGCTCTTGGTTATGATTGGGCTATAAAACCAATCATTACTGCTGGAGTAAATATCAACTTCCGTGACGTGAATGGATGGACAGCTCTACACTGGGCTGCATTCTGTGGCCGAGAGCGAACAGTTGCTGTCCTTGTCTCAATGGGTGCATTTGCTGGAGCATTAACAGATCCATGTCCAGAATTTCCTTCGGGTAAAACACCAGCAGATCTTGCTTCTAGCAAAGGTGACAAAGGACTTTCGGGTTTTCTTGCAGAGTCATTGTTAACTAGCCATCTTGAATCACTCACAATGGATGACAATAAAGATGGTAGGAATGAAACTTCAGGAATAAAAGTAGTGCAAACAGTTTCAGAGCGAACTACGACACCTGTGATTTATGGTGATATACCAGATGCTATCTGCCTTAAGGATTCTCTTAATGCTGTCCGTAATGCTACACAAGCTGCTGATCGTATACATCAAGTATTCAGAATGCAATCATTTCAGAGGAAGCAGTTAGCTCAGTATGAAGATGATGATGAATTGGGATTGTCAGATCAACAAGCTCTTTCCTTCATAGCTTCTAAGGCTTGCAAATTGGGACAAGGAGAGGGTTTAGCCAACGCTGCTGCAATACAAATACAGAAAAAGTTCCGTGGTTGGAAGAAGAGAAAAGAATTCTTGATCATTCGTCAAAGAATTGTTAAAATTCAGGCCCATGTAAGAGGTCACCAGGTCAGAAAACAGTATAAACCAATCATTTGGTCCGTGGGAATCCTGGAAAAGGTGATATTACGGTGGAGGCGCAAGCGCAGTGGTTTACGAGGATTTCGACCAGATGCCCTGAATAAGGTGTCTAGCCAACCTAAGGAGTCTGTTAAAGAGGATGATTATGATTTTCTTAAGGAAGGAAGAAAACAAAGTGAAGTAAGGTTCCAAAAGGCCCTTTCACGGGTAAAGTCCATGGTTCAGTATCCAGAGGCACGGGCGCAATACCGGCGGGTGCTAAATGTAGTTGAGGACTTCCGTCAAACAAAGGGAGGTAATTTGAATTTGATAAATTACGAAGAGACAGTTGATGGTGTGGAGGATTTAATTGATATTGACATGCTTTTAGATGATGAAAATTTCTTACCTATAGCATTCGATTGATTCTCTGCTGTAGCTCCATCCACCCACACCCTCCGGTAAATAGATGGCCAGATAGATGGTTTTATTCGGCATCGGAAGATCCTAACATCGTGTGCTGCTGTGTGTATATATATATATATATATATAATCAGAACTGCTTGGGTCATAGTTCTTCCTGTTTTCCAGCAAGAAACTAATTGGATCCAAGTTGAGTTTATAATAGATTATGAAACCTAGAATGCGATCAGGTTTGACTGTTCAAATATATAGACATGGTTTAATTTATATATATATGGTGATTTGTATATGACAGGATGG 3681 0.4146 MAERASYGLGPRLDLQQLQLEAQHRWLRPAEICEILRNYRMFQITSEPPNRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVGSVDVLHCYYAHGEENENFQRRSYWMLETDMMHIVFVHYLDVKVNKTNIGGKTYTGEATSDSQKSSSLSSGFRRNYGSVPSGSTDSMSPTSTLTSLCEDADSEDIHQASSGLHSYHESQNLGNDRQMDKIDARSNSDHGQLPMSGTEYIPLVQGDKSRVNDTTQIDGQRAHGIASWDNAVEQSAGRHTDSSVVSSTSIPSSTLGNSLEDHTVPGNLLGHKNTHNEEDRVSKPVQSNWQIPFEDNMGELPKWSFTQSLSLEFESDYGASLLGDVTNNASPEIVPELFALNGEPKAQVMQQNFSKQYTQAQSQPASKSSSEYETPGEASISYALNMKRGLLGGEESLKKVDSFSRWISKELAGVDDLQMQSSPGISWSTDECGDVIDDTSLNLSLSQDQLFSINDFSPKWAYAESEIEVLIIGTFLKSEPEVATCNWSCMFGEVEVPAEILANGILCCQAPPHKTGRVPFYVTCSNRFACSEVREFEYREGFDRNTDLANFFSSLTEMMLHLQLVRLISLNSVQNSKQVFEDDMEKRNLIFKLISLKEEEEYSNKEETTIEMDISKHKLKQVKEKLYSWLLHKVTETGKGPLVLGEEGLGVLHLVAALGYDWAIKPIITAGVNINFRDVNGWTALHWAAFCGRERTVAVLVSMGAFAGALTDPCPEFPSGKTPADLASSKGDKGLSGFLAESLLTSHLESLTMDDNKDGRNETSGIKVVQTVSERTTTPVIYGDIPDAICLKDSLNAVRNATQAADRIHQVFRMQSFQRKQLAQYEDDDELGLSDQQALSFIASKACKLGQGEGLANAAAIQIQKKFRGWKKRKEFLIIRQRIVKIQAHVRGHQVRKQYKPIIWSVGILEKVILRWRRKRSGLRGFRPDALNKVSSQPKESVKEDDYDFLKEGRKQSEVRFQKALSRVKSMVQYPEARAQYRRVLNVVEDFRQTKGGNLNLINYEETVDGVEDLIDIDMLLDDENFLPIAFD 1064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03292 1064 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 14 1026 - -
Pste3g03292 1064 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 889 938 IPR027417 -
Pste3g03292 1064 Pfam IQ calmodulin-binding motif 890 908 IPR000048 GO:0005515
Pste3g03292 1064 Pfam IQ calmodulin-binding motif 913 932 IPR000048 GO:0005515
Pste3g03292 1064 Gene3D - 645 770 IPR036770 -
Pste3g03292 1064 MobiDBLite consensus disorder prediction 265 293 - -
Pste3g03292 1064 MobiDBLite consensus disorder prediction 264 316 - -
Pste3g03292 1064 Coils Coil 637 657 - -
Pste3g03292 1064 SMART iq_5 887 909 IPR000048 GO:0005515
Pste3g03292 1064 SMART iq_5 910 932 IPR000048 GO:0005515
Pste3g03292 1064 MobiDBLite consensus disorder prediction 386 406 - -
Pste3g03292 1064 MobiDBLite consensus disorder prediction 137 178 - -
Pste3g03292 1064 FunFam Calmodulin-binding transcription activator 2 887 935 - -
Pste3g03292 1064 Gene3D Immunoglobulins 478 573 IPR013783 -
Pste3g03292 1064 SMART CG_1_2 18 127 IPR005559 GO:0003677
Pste3g03292 1064 Pfam IPT/TIG domain 485 570 IPR002909 -
Pste3g03292 1064 SUPERFAMILY Ankyrin repeat 667 772 IPR036770 -
Pste3g03292 1064 ProSiteProfiles Ankyrin repeat profile. 712 744 IPR002110 GO:0005515
Pste3g03292 1064 Pfam CG-1 domain 21 125 IPR005559 GO:0003677
Pste3g03292 1064 FunFam Calmodulin-binding transcription activator 2 478 574 - -
Pste3g03292 1064 ProSiteProfiles IQ motif profile. 911 935 IPR000048 GO:0005515
Pste3g03292 1064 Gene3D - 888 934 - -
Pste3g03292 1064 ProSiteProfiles Ankyrin repeat region circular profile. 712 737 - -
Pste3g03292 1064 ProSiteProfiles CG-1 DNA-binding domain profile. 15 132 IPR005559 GO:0003677
Pste3g03292 1064 SUPERFAMILY E set domains 485 571 IPR014756 -
Pste3g03292 1064 ProSiteProfiles IQ motif profile. 888 917 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03292 Pste-Chr3 25524983 25535514 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03292 1 1045 CAMTA Transcription Factor Family AT5G64220 52.341 0.0 1032
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Pste3g03292 CG-1 3.4e-40 No_clan