Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03291 CCATAACTTAACTAACGCAGACACACAAGCACAAAAGTCTTTCCCTCTAAACACATCGGTCGGGAGAGCATGCAAAGACCAGACCAACGTGCCTGAGTGAGATAGATAAGACTTAGGCATTCCTTCTCTGCTCTTGTTGCTTTTTCATATAAGCTTGCCAACCCATTCTCCGAGAATAAAAAAAAGGTTGTAGAACCATAAAAGACCAACTAGTTGATCTGGATCCTTAATGATTCAGGACTTGAAAGTTGAAAGTGAAGAAGCAGTGTACGGGGATAGAAAGCCTGTAGCCAAACCTTTTTGACAATGATTTAGCTAGGTTCTCTTTTCTATTATTTCTTTCACTGTACTGCATCTGAACTCTGAAGAATAAGCACAATAGAATACAACAACCCGTCATTCGATCGGCACAACCAGCTCACAACTTCAATCTTCCTTATCCCCGCAACTCAGCTTGAGCCAAATATATAGAGCAAAGTGGGAAGCGACTAGAGAGGGAGGGAGGGAGTAGAGATGGAGCAATCAGAAAAATCGCCAGTGAGAGCATCATTTCCGAGAGATCCACGTGGCTCACTCGAAGTGTTCAACCCAAGCACTTCAACTTCACCGAACGCGCGCTTGCGGTTACCGCCGCTTTGGAAATCGTGGACGGAGTCGGAAGAACCGCGGCATGAAATCGCCGCGACTTCGTGGATGGCCATCAATCCGGCGCCTGCTGAGGCCGGAGGATCCGGCGCGGCGGAGCAGAGGGCCGCGGAGTGGGGGCTGGTGCTCCGGACGGACACTGAGACCGGGAAGCCGCAGGGAGTGGCGGTGAGGAACTCCGGCGGCGAGGAACCTAACACGGTGAAACTGGGCGGCGCTTCGAGGAAGAACTCGCAGAACTCAGCCAGGACCTCCGGCGACTCATCGGACGGCGGCGGGATTCCTAGAATTTCGGAGGACGTGATGGGCGCTTTGTCGGCTTTCCAACAGACGTTCGTGGTTTCGGATGCTACAAAACCCGATTACCCGATCCTCTATGCGAGTGCTGGCTTCTTTAGAATGACGGGTTATACTTCCAAGGAAGTCATTGGCAGAAACTGCCGGTTTTTACAGGGTGCGGACACGGATCCCAATGACGTGGCAAAGATAAGGGTAGCATTGCAAGGCGGGAAAATTTACTGCGGAAGGCTACTGAATTACAAGAAGGATGGGACACCTTTCTGGAACCTTCTCACTATTTCACCCATTAAGGATGAAGATGGCAAAGTGCTCAAATTTATCGGTAGTTGGAGGGGTGCTTCCCTTGAATCTGAGGAATTTTTTAACCATGGAATGTTTCAGATATTTAACAGCTGCCTTGTCCGAGACAAACAGCCTGGGATGCAAGTGGAAGTTAGCAAGCATACGGAGGGGTCCAAAGAGAAGATGCTGCGTCCCAACGGATTGCCCGAATCTTTGATTCGATATGATGCACGGCAGAAAGAGAAGGCTACAAGTTCAGTATCTGAACTGGTGCAGGCCATGAAGCGCCCCCGAGCATTAAGTGAATCCGCAAGCCGTCCCTCCATCAGAAAATCAGGATCTGCTGATGAAGAAAATGAACTAGAACAACAAGTAGAGCAAGCAGAAAAAACATTAAGAAGGAAATCTGAGAGTGGAACTTCATTTGGACACAAATCAGAAGGAGGAAATAAAATTCCAATGCAGCCAATCAAGGACGTCAGCTCTGAGAGTGAGGATGATGAGAAGCCTGCTAGTTTTGAATTAGATGACAAAAAAAAGCAAAGGGAAAAGCGAAAGGGTCTTGATCTTGCTACCACGCTTGAACGTATTGAGAAAAACTTTGTCATCACTGATCCAAGGCTTCCAGACAATCCTATAATCTTTGCTTCGGATAGCTTCTTAGAGCTTACAGAATATAGTCGTGAAGAAATATTGGGAAGGAATTGCAGGTTTCTGCAAGGACCTGAAACTGATCCCGCAACTGTGAGAAAAATTAGAGAGGCAATTGACAACCAAACAGAAGTTACTGTGCAACTGATTAATTATACGAAGAGTGGAAAAAAGTTCTGGAACCTGTTTCATTTGCAACCTATGCGTGATCAGAAGGGAGAAGTGCAGTATTTTATTGGTGTTCAACTTGATGGTAGCCAACATGTAGAGCCTCTTCACAACTGCATCACAGAAGATTCTGCAAAGGAGGGAGAACAATTGGTCAAACAAACTGCGGAAAATGTTGACGAGGCAGTGAGAGATCTTCCGGATGCTAATATGAAACCAGACGATTTATGGTTAAATCATTCAAAGGCAGTTCACCCCAAACCACATAGGAAGGATGACCTTGCTTGGAAAGCTATCCAGAAGGTCCTAGAAAGTGGAGAACAGATAGGCTTGAAGCACTTTAAGCCAATTAAACCTTTGGGGTCAGGAGATACTGGCAGTGTGCATTTGGTGGAGCTACATGGAACTGGTCAATATTTCGCCATGAAGGCTATGGATAAGGGTGTGATGCTCAATCGCAACAAGGTGCACAGAGCTTGCGCAGAGAGAGAAATCCTTGACAAGTTGGACCACCCTTTTCTACCTGCATTATATGCTTCCTTTCAGACCAAAACACACGTTTGTCTGATAACTGACTATTGTCCCGGGGGAGAACTATTCCTGCTTCTTGACCGACAGCCAACTAAGGTTCTAAAGGAAGACGCCGTGAGATTTTATGCAGCTGAAGTAGTGATTGCGTTGGAGTACCTTCATTGCCAGGGGATAATATATCGGGATTTAAAGCCAGAGAATGTGTTAATTCAGAGCAGTGGGCATGTGTCCCTAACAGATTTTGATTTGTCATGTTTAACATCTAGCAAGCCACAGCTTATAATTCCAGCTACGAATTCAACGAAGAAGAAGAAAAAGAAACAACAGAAAAGTCAGGAGGTTCCAATGTTTATGGCTGAACCAATGAGAGCATCAAATTCTTTTGTTGGCACGGAAGAGTACATAGCTCCGGAAATTATAACTGGTTCAGGTCACACTAGTGCTGTAGATTGGTGGGCTCTAGGTATTCTAATATTTGAAATGCTTTATGGGTATACTCCGTTCCGGGGTAAGACAAGACAAAAAACATTTGCAAATATTCTTCACAAGGATCTTAAATTTCCCAAAAGTAAACCGGTAAGTCTCCAGGGAAAGCAGCTAATTTACTGGTTGTTGCAGAGAGATCCAAAAGACAGATTGGGTTCACGTGAAGGAGCAAATGAAATTAAACGTCATCCCTTCTTCCGGGGTGTCAATTGGGCACTAAAACCTCCAGAGCTTGATGCTCCTCTCTTACCGGAAACTGAAGAAGAAAAAGAAGCCAAAAATATAGATACTGGGCTAGAGGATCTACAGACAAATGTTTTCTGAAAGTGAAAGGCAAATAATTTCATCCTCGCTCTGTGTATATGTCGCTCTGTGGACTAGCTTTTAACATCTTATCTTGTGGCCTGTAGGATTAGAGGATTATGGCATTCTCGAAACACATGATGAATTCTTTTCCATATTGACCAATCATTGGAATTTTATTCCCTTCCTTCAGTGGTGCAAAGTTTGATTATATTCGTTGTAATTTAAGAAAGGAAATTACAATAAGTTTTTTAGATTTGGTAAGACTTAAGCTGCCTACTCTTCCAATAGGATTGAGATTTGAGACCATCAAGTAATTAGTCTGAAATTTGTGTATACTGGAATAATATTGAGTCATTTAAAACATGCCTTGTAACA 3744 0.4442 MEQSEKSPVRASFPRDPRGSLEVFNPSTSTSPNARLRLPPLWKSWTESEEPRHEIAATSWMAINPAPAEAGGSGAAEQRAAEWGLVLRTDTETGKPQGVAVRNSGGEEPNTVKLGGASRKNSQNSARTSGDSSDGGGIPRISEDVMGALSAFQQTFVVSDATKPDYPILYASAGFFRMTGYTSKEVIGRNCRFLQGADTDPNDVAKIRVALQGGKIYCGRLLNYKKDGTPFWNLLTISPIKDEDGKVLKFIGSWRGASLESEEFFNHGMFQIFNSCLVRDKQPGMQVEVSKHTEGSKEKMLRPNGLPESLIRYDARQKEKATSSVSELVQAMKRPRALSESASRPSIRKSGSADEENELEQQVEQAEKTLRRKSESGTSFGHKSEGGNKIPMQPIKDVSSESEDDEKPASFELDDKKKQREKRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIREAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLHNCITEDSAKEGEQLVKQTAENVDEAVRDLPDANMKPDDLWLNHSKAVHPKPHRKDDLAWKAIQKVLESGEQIGLKHFKPIKPLGSGDTGSVHLVELHGTGQYFAMKAMDKGVMLNRNKVHRACAEREILDKLDHPFLPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVIALEYLHCQGIIYRDLKPENVLIQSSGHVSLTDFDLSCLTSSKPQLIIPATNSTKKKKKKQQKSQEVPMFMAEPMRASNSFVGTEEYIAPEIITGSGHTSAVDWWALGILIFEMLYGYTPFRGKTRQKTFANILHKDLKFPKSKPVSLQGKQLIYWLLQRDPKDRLGSREGANEIKRHPFFRGVNWALKPPELDAPLLPETEEEKEAKNIDTGLEDLQTNVF 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03291 957 ProSiteProfiles PAS repeat profile. 141 190 IPR000014 -
Pste3g03291 957 NCBIfam PAS domain S-box protein 449 539 IPR000014 -
Pste3g03291 957 NCBIfam PAS domain S-box protein 168 254 IPR000014 -
Pste3g03291 957 MobiDBLite consensus disorder prediction 349 379 - -
Pste3g03291 957 ProSitePatterns Serine/Threonine protein kinases active-site signature. 746 758 IPR008271 GO:0004672|GO:0006468
Pste3g03291 957 FunFam LOV domain-containing protein 413 577 - -
Pste3g03291 957 Gene3D Transferase(Phosphotransferase) domain 1 709 935 - -
Pste3g03291 957 PANTHER FLIPPASE KINASE 1-RELATED 328 936 - -
Pste3g03291 957 ProSiteProfiles PAS repeat profile. 424 497 IPR000014 -
Pste3g03291 957 FunFam LOV domain-containing protein 624 708 - -
Pste3g03291 957 SUPERFAMILY Protein kinase-like (PK-like) 609 932 IPR011009 -
Pste3g03291 957 MobiDBLite consensus disorder prediction 322 424 - -
Pste3g03291 957 MobiDBLite consensus disorder prediction 89 140 - -
Pste3g03291 957 Coils Coil 349 376 - -
Pste3g03291 957 SUPERFAMILY PYP-like sensor domain (PAS domain) 162 254 IPR035965 -
Pste3g03291 957 SMART pac_2 218 260 IPR001610 -
Pste3g03291 957 SMART pac_2 501 543 IPR001610 -
Pste3g03291 957 Gene3D Phosphorylase Kinase; domain 1 624 946 - -
Pste3g03291 957 ProSiteProfiles Protein kinase domain profile. 625 916 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03291 957 Pfam Protein kinase domain 627 916 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03291 957 SUPERFAMILY PYP-like sensor domain (PAS domain) 440 539 IPR035965 -
Pste3g03291 957 ProSiteProfiles PAC domain profile. 498 552 IPR000700 -
Pste3g03291 957 Gene3D PAS domain 413 577 - -
Pste3g03291 957 MobiDBLite consensus disorder prediction 290 310 - -
Pste3g03291 957 ProSitePatterns Protein kinases ATP-binding region signature. 631 654 IPR017441 GO:0005524
Pste3g03291 957 MobiDBLite consensus disorder prediction 115 132 - -
Pste3g03291 957 CDD PAS 168 255 IPR000014 -
Pste3g03291 957 Pfam PAS domain 447 539 IPR000014 -
Pste3g03291 957 Pfam PAS domain 162 255 IPR000014 -
Pste3g03291 957 CDD STKc_phototropin_like 623 935 - -
Pste3g03291 957 SMART pas_2 426 495 IPR000014 -
Pste3g03291 957 SMART pas_2 143 212 IPR000014 -
Pste3g03291 957 SMART serkin_6 625 916 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03291 957 FunFam Putative LOV domain-containing protein 709 925 - -
Pste3g03291 957 Gene3D PAS domain 155 372 - -
Pste3g03291 957 MobiDBLite consensus disorder prediction 398 424 - -
Pste3g03291 957 CDD PAS 439 539 IPR000014 -
Pste3g03291 957 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03291 Pste-Chr3 25494336 25519857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03291 1 957 AGC Kinase Gene Family AT3G45780 66.409 0.0 1281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pste3g03291 Pkinase 1.8e-64 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03291 3 25494336 25519857 Pste3g03291 3 25494336 25519857 ECH
Pste3g03291 3 25494336 25519857 Pste1g02452 1 8937249 8951362 PCT