Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03287 AAATCAAGAAAAAAATTGAACAACGTTAATAAAAAAGACAAGCAGAACAATCATTCTACTACGGATAAGGTGGAAGTTGATTTGAATGTGAATTGTAAAAGAGAAGATAATAACCCTAAGCCTGATCAACTATCTCTAGACGTGAAGAGTTTGAATTTAAAAGAGGTTTCCAATGAAGGAAAAGTTAACGGTTACCAAGCACGAACATTTAGTTTTGATGAGCTTGCAACTGCAACAAGGAATTTTAGGTTAGATTGTTTTCTGGGTGAAGGAGGGTTTGGCAAGGTATACAAAGGGCAAATAGAGAAAATAAATCAGGTAGTAGCAATAAAGCGATTAGACCCTCATGGACTTCAAGGAATTAGGGAATTTGTTGTTGAAGTATTGACATTGAGTTTGGCTGACCACCCTAATTTGGTCAAAAAGAGAGCAAAGACTATTGATCTTCGACGTGGCAAAAAACCACTTGATTGGAATACAAGAATGAAAATAGTAGCCGGTGCAGCTAGAGGATTAGAGTATTTGCATGATAAAATGAAACCTCCTGTCATATACCGTGACTTGAAGTGCTCCAATATTCTATTAGGAGAAGGATATAACCCTAAGTTATCTGATTTTGGCCTAGCAAAAGTAGGGCCAATTGGTGATAAAACCCATGTATCAACAAGAGTTATGGGAACATATGGGTATTGTGCTCCAGATTATGCGATGACAGGTCAATTGACATTCAGGTCTGATATTTATAGCTTTGGAGTTGTTCTTTTAGAGATCATCACAGGCAGAAAGGCCATCGATAACACAAAATCTTCTAAAGAACAAAACCTAGTTGCATGGGCAAGGCCTTTATTCAGAGATCGAAAAAGATTTTGTAAGATGGTTGACCCATTGCTAGAAGGTCAGTATCCAATTAGGGGCTTATACCAAGCTCTTGCTATTGCTGCTATGTGTGTTCAAGAACAACCTAATATGCGTCCTGTTATAGCCGATGTGGTTACAGCTCTTAATTACCTTGCATCCCAAAAATATGATCCACAAATTCATTTAAAACAAAGTTGTACAAAAGGTTCAACTTCTCCTCAAGAAGGAAGAAAGAGTCATAGAACAACTATTAGTAATGGTCATAGTAGTGGTCTTGAGACATATAGCTCTAGAAAAGGTCTATCTTCTCCAAGAGTAAGAAGTAATGATCATAGACATTTTGTTAATGATGATGGTTTTGAGACCGACAATTATGGAGAT 1239 0.3688 KSRKKLNNVNKKDKQNNHSTTDKVEVDLNVNCKREDNNPKPDQLSLDVKSLNLKEVSNEGKVNGYQARTFSFDELATATRNFRLDCFLGEGGFGKVYKGQIEKINQVVAIKRLDPHGLQGIREFVVEVLTLSLADHPNLVKKRAKTIDLRRGKKPLDWNTRMKIVAGAARGLEYLHDKMKPPVIYRDLKCSNILLGEGYNPKLSDFGLAKVGPIGDKTHVSTRVMGTYGYCAPDYAMTGQLTFRSDIYSFGVVLLEIITGRKAIDNTKSSKEQNLVAWARPLFRDRKRFCKMVDPLLEGQYPIRGLYQALAIAAMCVQEQPNMRPVIADVVTALNYLASQKYDPQIHLKQSCTKGSTSPQEGRKSHRTTISNGHSSGLETYSSRKGLSSPRVRSNDHRHFVNDDGFETDNYGD 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03287 413 Gene3D Phosphorylase Kinase; domain 1 66 146 - -
Pste3g03287 413 Pfam Protein kinase domain 154 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03287 413 FunFam Serine/threonine-protein kinase PBS1 140 352 - -
Pste3g03287 413 MobiDBLite consensus disorder prediction 350 389 - -
Pste3g03287 413 ProSiteProfiles Protein kinase domain profile. 82 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03287 413 MobiDBLite consensus disorder prediction 1 26 - -
Pste3g03287 413 MobiDBLite consensus disorder prediction 390 406 - -
Pste3g03287 413 Gene3D Transferase(Phosphotransferase) domain 1 147 356 - -
Pste3g03287 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Pste3g03287 413 SMART serkin_6 82 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03287 413 MobiDBLite consensus disorder prediction 9 26 - -
Pste3g03287 413 MobiDBLite consensus disorder prediction 350 413 - -
Pste3g03287 413 PANTHER OS07G0668900 PROTEIN 147 345 - -
Pste3g03287 413 ProSitePatterns Protein kinases ATP-binding region signature. 88 111 IPR017441 GO:0005524
Pste3g03287 413 Pfam Protein tyrosine and serine/threonine kinase 85 142 IPR001245 GO:0004672|GO:0006468
Pste3g03287 413 SUPERFAMILY Protein kinase-like (PK-like) 68 348 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03287 Pste-Chr3 25439257 25442066 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03287 63 339 Glycoside Hydrolase AT3G07070 57.191 6.68e-123 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pste3g03287 Pkinase 4.1e-23 CL0016