Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03282 GAAAAAAAATTAAAATGGCGCCCAGTGTGAAGCAAAACGTTTTTCGCATTGATAGTGAAGTTAAGATAGTAGGTAACTTGGTAACTACAAGTCGTCGTGAGGACTCTTCTTTTCTCTTCTCTATTCTCCCACATAATTCAATGGATTCTGCGTTTTCCGTCACCAACACCACGCACATGGCGCTTTTTAGAGCGCTCCACCGACATTTCCACGGAGCTCCTCAACGCGCCTTCCTCCGCCGCAACCTCAAATGCATCGTCGCTTCCTACAGCAATTGTTGCCGCATTCCGTGTTCTTTCTCCTCACCGCCGTCGCTGTCTTCGCTCGGCTCCTTCCATGGACTGCTCCCGCGAACGCCTTGCCGGACGCGCTGCATTTCGAGCTCCGCCGCCACTTTTGCTTCTTCTGCCGGCGGTGGAAATGGAGGCTCTGGAACCGGTGACGGTGGCGGAGACGGCGGTTCTGGCGGTGAGTCTGGGGATGCTAGCCTCAAATTGGTTGGGGACGCGGCTCAGGAGCTTTCGGAACTTTCGACTGATGTTATCATCCTCGATGTTTCCGGAATGGTGTGTGGGGGATGTGCAGCGAATGTGAAAAGGATACTGGAAAGTCGACCACAGGTCTCATCTGCTAGTGTAAATTTAACAACAGAGACAGCAATAGTTTGGCCTGTATCTGAAGCTAAAAATGCACCAAATTGGCAAAAGCAATTAGGGGAGGCACTTGCAGAGCATTTGACTAGCTGTGGTTATAATTCTAGCCTTCGAGAATCAAAAAGTGACAATTTCCTCCAAATTTTTGAAAGGAAGATGGAGGAAAGACATAGAAAATTAAGAGAAAGTGGTCGTGAGCTAGCTGTTTCTTGGGCTCTATGCGCTGTCTGTCTTGTTGGCCATTTCTCTCATTTCTTTGCAGCAAAGGCACCATGGATCCATGTATTTCATTCCGTTGGATTTCATCTATCCTTGTCTTTGTTTACATTGCTTGGTCCTGGCCGCCAACTTATCCTTGATGGCTTAAAAAGCCTTCTTAAAAAGACGCCAAACATGAACACCTTAGTTGGTCTTGGGGCTTTATCATCATTTACAGTTAGTTCATTTGCTGCCTTGCTGCCAAAATTGGGTTGGAAGGCTTTCTTTGAGGAGCCAATTATGCTAATTGCATTTGTGTTGTTAGGAAGGAATCTTGAACAGAGAGCTAAAATTAAAGCAGCCAGTGATATGACAGGACTTCTTAGTTTACTGCCACCAAAAGCTCGCCTTCTACTGAACAGTGAGGAAACAGAGATTGACTCTGTTGTTGAAGTTCCTTCTGACAGTCTTTCTGTTGGAGATCAAATTATTGTATTACCTGGAGACCGTATTCCAGCTGATGGAGTTGTGAGGGCAGGTAGAAGCACTGTAGATGAATCAAGTTTCACTGGTGAACCACTGCCTGTAACAAAATTACCTGGGAGTGAGGTAGCAGCTGGAAGTATAAACCTTAATGGAACTCTTACAATTGAAGTGCGGAGACCAGGTGGTGAGACTGCTATGGCAAACATTGTTCGACTAGTTGAAGAGGCACAAAGTAGGGAAGCTCCTGTACAGCGGTTGGCTGACAAGGTGGCTGGACATTTTACTTATGGAGTGATGGCAGCCTCTGCTGCCACATTTGCATTCTGGAGTCTATATGGCAAACACATTTTACCTCCTGCTTTATATCAAGGAAGTGCAGTTTCCCTGGCTTTGCAGCTTGCTTGCAGTGTTCTGGGTAGGGATAAGGAAACAGTCATGTGTGGTTTAGCAGATCAACCATTTTCTGGTACCAAAGAGGTTATTGCTTGTCCATGTGCACTTGGGTTAGCCACACCTACTGCAGTGCTGGTTGGAACTTCTTTAGGAGCTAAAAAAGGCTTACTTCTGCGTGGTGGAAATATTCTAGAAAAGTTTGCCATGGTAAACACTGTTGTGTTCGACAAAACGGGAACCCTTACAGTTGGTAGACCTGTTGTGACAAACATTGTCACTCCTACATGCATAAAAAATGCAATTTCAAGCCAAACTGAAGAAAATGCATTTTCTGATGCTGAAGTTCTAAGGTTAGCAGCTGCAGTAGAATCAAATTCAGTACATCCAGTTGGGAAAGCAATTGTTGACGCTGCTCAGGCTGTTAATTGTTATAATGCTAAGGTAACTGATGGAACATTCCTGGAAGAACCTGGATCTGGAGCTGTGGCCACAATTGATAACAAAAAGGTTTCTGTTGGGACATTGGAATGGATTACCAGGAATGGAGTTATTAACAGTATACATCAAGAAGTGGAGAAGTTTAATAACCAATCCTTTGTCTATGTTGGAGTTGATGATACTTTAGCTGGCTTAATTTATTTTGAAGATAAGATAAGGGAAGATGCAAGAGATGTTGTCGACAGATTGTCAAAGCAAAATATAGGTGTATACATGCTATCAGGAGACAAGAGGAACGCTGCTGAGCATGTTGCTTCTCTTGTTGGAATTCCCAAAGAGAAGGTGCTAGCTGAAGTAAAACCAGATGAGAAAAAGAAGTTCATAAATGAGCTACAGAAAAATAAGAACATTGTAGCTATGGTTGGTGATGGAATTAACGATGCAGCTGCCCTGGCTTCTTCACATGTTGGTATTGCATTAGGTGGAGGTGTCGGGGCTGCTGGTGAGGTGTCTTCTATTGTATTAATGCGCAACCAGCTCTCACAGATCTCTCTCTCCATTGAGCTTATCCTGTCATCTTTGCGACCATTGAGTTTGTCCCACTTCAGTGAATCTGACCCTGTACTAGTTGATGCCTTGGAGCTTAGCAGGCTGACCATGAATACTGTAAAACAAAATCTTTGGTGGGCTTTCATTTACAACATTGTAGGAATTCCAATTGCAGCTGGAGTGTTATTTCCGATAAATGGGACTGTGCTGACTCCATCAATTGCTGGGGCTCTCATGGGGTTCAGTTCCATTGGCGTAATGACTAACTCCTTACTTTTGAGATTAAAATTTTCCTCAAAGCAGAAACAAATGCATAGCACGTTGCCAAAGACCAAAATCCATGTGGATTCTGATCTGGAACAACAAAACTAGAAAACAAACCACCCATATTAGATGTTGGATGCAGGCACATAGTAACACAACGGAAAGGAGGTTCCCCTCCTGATTTCAGATCAGGATTTTGGGGGAAAGGAGGATCAAGAAACTAGAGTCAACTGTGCTTGTGTTGGTCTCTTTCTCCATTGACATTGTTTGGTACGTTATTGTCTCTTGCGGAGTTATTTCCAAGACACTCGTACCTTGAGAGGTATGTCTATTTCAACTAGTTGAAAAGGTTTGTAGTTTTTTTCATCTTTGTAATAAAATTTTGCAAGTGATTTTCTTTTTATTTTACTTGTTTCTCTTCTTCAAGATCTTGTTATTTCTCTCTTTTTTTTCTCTACTTTTCCCATTTGCTCTATCATATTCTACTTATGTATTTATGTATTACCACAGTTTATATCTTCCTTGATTTGCAACTTTTGTTTTTAGTAAAGCATTAAACTACCATAAGTAACGAAAACTGCAGTTGCCACAGCTAGTAAACACGATAAAGCTTCAGGTTTAAAGTGTTTCCTGATCTACTAGAGTATAATTCATTAAAATTGC 3644 0.4267 MAPSVKQNVFRIDSEVKIVGNLVTTSRREDSSFLFSILPHNSMDSAFSVTNTTHMALFRALHRHFHGAPQRAFLRRNLKCIVASYSNCCRIPCSFSSPPSLSSLGSFHGLLPRTPCRTRCISSSAATFASSAGGGNGGSGTGDGGGDGGSGGESGDASLKLVGDAAQELSELSTDVIILDVSGMVCGGCAANVKRILESRPQVSSASVNLTTETAIVWPVSEAKNAPNWQKQLGEALAEHLTSCGYNSSLRESKSDNFLQIFERKMEERHRKLRESGRELAVSWALCAVCLVGHFSHFFAAKAPWIHVFHSVGFHLSLSLFTLLGPGRQLILDGLKSLLKKTPNMNTLVGLGALSSFTVSSFAALLPKLGWKAFFEEPIMLIAFVLLGRNLEQRAKIKAASDMTGLLSLLPPKARLLLNSEETEIDSVVEVPSDSLSVGDQIIVLPGDRIPADGVVRAGRSTVDESSFTGEPLPVTKLPGSEVAAGSINLNGTLTIEVRRPGGETAMANIVRLVEEAQSREAPVQRLADKVAGHFTYGVMAASAATFAFWSLYGKHILPPALYQGSAVSLALQLACSVLGRDKETVMCGLADQPFSGTKEVIACPCALGLATPTAVLVGTSLGAKKGLLLRGGNILEKFAMVNTVVFDKTGTLTVGRPVVTNIVTPTCIKNAISSQTEENAFSDAEVLRLAAAVESNSVHPVGKAIVDAAQAVNCYNAKVTDGTFLEEPGSGAVATIDNKKVSVGTLEWITRNGVINSIHQEVEKFNNQSFVYVGVDDTLAGLIYFEDKIREDARDVVDRLSKQNIGVYMLSGDKRNAAEHVASLVGIPKEKVLAEVKPDEKKKFINELQKNKNIVAMVGDGINDAAALASSHVGIALGGGVGAAGEVSSIVLMRNQLSQISLSIELILSSLRPLSLSHFSESDPVLVDALELSRLTMNTVKQNLWWAFIYNIVGIPIAAGVLFPINGTVLTPSIAGALMGFSSIGVMTNSLLLRLKFSSKQKQMHSTLPKTKIHVDSDLEQQN 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03282 1024 Pfam E1-E2 ATPase 409 568 - -
Pste3g03282 1024 Gene3D - 395 518 - -
Pste3g03282 1024 SUPERFAMILY HAD-like 634 901 IPR036412 -
Pste3g03282 1024 ProSitePatterns Heavy-metal-associated domain. 181 210 IPR017969 GO:0046872
Pste3g03282 1024 FunFam Copper-transporting ATPase 1, putative 396 518 - -
Pste3g03282 1024 CDD HMA 179 246 IPR006121 GO:0046872
Pste3g03282 1024 PANTHER ATP7, ISOFORM B 170 996 - -
Pste3g03282 1024 Gene3D - 657 790 IPR023299 GO:0000166
Pste3g03282 1024 Pfam haloacid dehalogenase-like hydrolase 642 871 - -
Pste3g03282 1024 SFLD p-type atpase 629 905 IPR044492 -
Pste3g03282 1024 FunFam Copper-transporting ATPase PAA1 chloroplastic 657 790 - -
Pste3g03282 1024 NCBIfam heavy metal translocating P-type ATPase 345 907 IPR027256 GO:0006812|GO:0016020|GO:0019829
Pste3g03282 1024 Gene3D - 176 254 - -
Pste3g03282 1024 Gene3D - 637 906 IPR023214 -
Pste3g03282 1024 SFLD C1.7: P-type atpase like 629 905 - -
Pste3g03282 1024 NCBIfam HAD-IC family P-type ATPase 695 904 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste3g03282 1024 ProSiteProfiles Heavy-metal-associated domain profile. 175 249 IPR006121 GO:0046872
Pste3g03282 1024 ProSitePatterns E1-E2 ATPases phosphorylation site. 648 654 IPR018303 -
Pste3g03282 1024 MobiDBLite consensus disorder prediction 128 156 - -
Pste3g03282 1024 Pfam Heavy-metal-associated domain 179 246 IPR006121 GO:0046872
Pste3g03282 1024 CDD P-type_ATPase_HM 280 993 - -
Pste3g03282 1024 SUPERFAMILY Calcium ATPase, transduction domain A 427 514 IPR008250 -
Pste3g03282 1024 PRINTS P-type cation-transporting ATPase superfamily signature 646 660 - -
Pste3g03282 1024 PRINTS P-type cation-transporting ATPase superfamily signature 882 894 - -
Pste3g03282 1024 PRINTS P-type cation-transporting ATPase superfamily signature 782 793 - -
Pste3g03282 1024 PRINTS P-type cation-transporting ATPase superfamily signature 464 478 - -
Pste3g03282 1024 PRINTS P-type cation-transporting ATPase superfamily signature 804 814 - -
Pste3g03282 1024 PRINTS P-type cation-transporting ATPase superfamily signature 859 878 - -
Pste3g03282 1024 SUPERFAMILY HMA, heavy metal-associated domain 176 248 IPR036163 GO:0046872
Pste3g03282 1024 SUPERFAMILY HAD-like 927 992 IPR036412 -
Pste3g03282 1024 FunFam Copper-transporting ATPase PAA1, chloroplastic 175 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03282 Pste-Chr3 25394668 25431669 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03282 327 1015 Primary Pumps ATPases AT1G63440 36.351 1.65e-115 378