Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03274 TGAACTTTTATAGTGTTCCGTTTGGATCCTCTCACCTTTCTCTCTCCTCCGGTGCCATGGAATCCGGTAGTGCCCGATGTTTTTTTCTCTCCGATTCTGAAATCACCGCCTAGGAAATGACAAATGCAACTACCAAACCTCTGGCTGCTTCCTTATTACACTTCCTTCTGTGAGTTTTCTATTCTTCCTTCCTTCTCCTTCCCTCTTTCCAGTCGCCGGAAAGTTTATCCGGCTAACTCACTGCAACCGGAGAATCTTCTAATTCTATTTTTCCTCTCTTTGCTTCTTTTCCGTCTTGTTCGTAGAAGAAGCTCTTTCTCATCCATTGTTATAACTCTATAACTCCTTCCGATATGGTGTCTTCAACCGTTTAGGTTGCACTTTACGCGGCGTAATATCTGATTGTTTCTTTCGATTGCATCGGTTTTCGCTGTTTGAACCATCGCTCTAAGAGAATCTCCGGCGACGTTGAAGCAAAATTAGTTTACTATGTTTTACTTCCAATTGATTACAATAAAGCGCATAACTAATACAGCATAAAAAATATAAAGAAAATTAGAGTTGAAAAATACGTTCAAGAAGATTAAACGCGATGTTGGATCTTAATCTGAATGCCGAGTCGACTCAGAACGACGACTCGCTGGTTCTGTTGGACAAGTTTCCCGAAGCTTCTTCGGGAACTTCTAATTCCTCCATCGTGAATGCGGATGGGTCGAGCAACGATGACTCGTGCTCGACACGCGCCGGCGACGTGTTCACCTTCAATTTCGGAATCCTTAAGGTCGAAGGCGCGAACGACGTGGTCGCCGCGACGAAGGAACTGTTTCCGGTAAGCACAGAGAATTGGCAGGGGCAGAGTTCGACGTCGTCATTTCAGGCTAGGAAGAGTTTGGTGGATCTCTCGATGGATCGTCCAAACGGCGAGGTGAAGGTGGTTCAGATTCAGCAACAGCCTCAGGTAAAGAAGAGTAGGAGAGGTCCACGGTCTCGGAGCTCTCAGTACAGAGGGGTCACCTTCTACAGAAGAACCGGAAGATGGGAATCGCATATTTGGGATTGTGGGAAACAAGTCTATTTGGGTGGATTTGATACCGCTCATGCCGCTGCTAGGGCTTATGATCGAGCTGCTATAAAGTTCAGGGGGTTTGATGCTGATATCAATTTTAATCTCGTTGATTATGAGGAGGACCTAAAACAGATGAAGAATCTTTCCAAGGAGGAGTTCGTTCACATACTCCGCCGCCACAGTACTGGTTTCTCAAGGGGCAGTTCGAAATATCGGGGAGTGACACTTCACAAATGCGGCCGTTGGGAAGCTCGCATGGGGCAATTCCTTGGCAAAAAGTATATGTATCTTGGGCTGTTCGACAGCGAAGTAGAAGCTGCAAGGGCTTATGACAAGGCGGCTATCAAGTGCAATGGAAGAGAGGCGGTGACTAACTTTGAGCCAAGTACATATGAGAGCGAGATGAAACCTGAAGCAATTAATGATGGTGGTAGTCACGATCTTGACCTCAATCTGGGCATAGCGACCCCAGGACACGGTCCCAAAGAAAACAGGGGGCATCTTCAGTTCCAGCCCGTCCCCTACAACACGCATCCCGTAAGAAGTTTAAGGATGGAGACTAACGTTAATTCGGTTATTGGTGATCCTTCTTTGAAAAGGCTGGTTATAGCTGAAGAGCGTCCTTCTGTATGGAATGCCGCATATCCCACTTTCTTTCCTCATCTGGAAAGAGCAGAGAGAATCGGCATAGATCCTTCAAAAGGAGTCGCCAACTGGGCGTGGGAAACACATGGCCATGTTACTGGTACCCCAGTACCAACGTTCTCTACTGCAGCATCATCAGGATTCTCTATTTCAGCTACCTTTCCATCGACTGCCATCTTTCCAACAAAATCTCCGAACTCGATTCCCCAGAGCCTCTGTATCACTTCGTCCAGCACACAAGGTAGGAATGCACATCAATTCTATTACACGAGGTGAAGTCCCCGCAGGCACCATCCCAGCCTATCTTGTGATATACAAGTATAAAGGGTAAATCACAACAAGCCTCTGCATTTAAAACTCTCATTGTATTAATTCTGTTACTGATTGATGTATACTTAGATACGACATCAGATTGCACCTTTTGGTTAAGCAATTACGCACAGTGATGTATGAAGGAAAAAGCTACTAGTGTTTTCTTCAAAATTAGTAACAGGTTGTCAAAATTGGTGTATTCGCTCAACAATTTTGAGAATATTTTCTTTGCGTATGCAACTCTTAAAATGGGCG 2278 0.453 MLDLNLNAESTQNDDSLVLLDKFPEASSGTSNSSIVNADGSSNDDSCSTRAGDVFTFNFGILKVEGANDVVAATKELFPVSTENWQGQSSTSSFQARKSLVDLSMDRPNGEVKVVQIQQQPQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGFDADINFNLVDYEEDLKQMKNLSKEEFVHILRRHSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYMYLGLFDSEVEAARAYDKAAIKCNGREAVTNFEPSTYESEMKPEAINDGGSHDLDLNLGIATPGHGPKENRGHLQFQPVPYNTHPVRSLRMETNVNSVIGDPSLKRLVIAEERPSVWNAAYPTFFPHLERAERIGIDPSKGVANWAWETHGHVTGTPVPTFSTAASSGFSISATFPSTAIFPTKSPNSIPQSLCITSSSTQGRNAHQFYYTR 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03274 464 PRINTS Ethylene responsive element binding protein signature 229 240 IPR001471 GO:0003700|GO:0006355
Pste3g03274 464 PRINTS Ethylene responsive element binding protein signature 267 287 IPR001471 GO:0003700|GO:0006355
Pste3g03274 464 MobiDBLite consensus disorder prediction 115 137 - -
Pste3g03274 464 ProSiteProfiles AP2/ERF domain profile. 228 285 IPR001471 GO:0003700|GO:0006355
Pste3g03274 464 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 95 317 - -
Pste3g03274 464 CDD AP2 227 287 IPR001471 GO:0003700|GO:0006355
Pste3g03274 464 MobiDBLite consensus disorder prediction 26 45 - -
Pste3g03274 464 Gene3D AP2/ERF domain 227 286 IPR036955 GO:0003700|GO:0006355
Pste3g03274 464 Gene3D AP2/ERF domain 135 194 IPR036955 GO:0003700|GO:0006355
Pste3g03274 464 Pfam AP2 domain 136 184 IPR001471 GO:0003700|GO:0006355
Pste3g03274 464 Pfam AP2 domain 227 277 IPR001471 GO:0003700|GO:0006355
Pste3g03274 464 FunFam AP2-like ethylene-responsive transcription factor 135 194 - -
Pste3g03274 464 FunFam AP2-like ethylene-responsive transcription factor 227 287 - -
Pste3g03274 464 SUPERFAMILY DNA-binding domain 227 286 IPR016177 GO:0003677
Pste3g03274 464 SUPERFAMILY DNA-binding domain 135 192 IPR016177 GO:0003677
Pste3g03274 464 ProSiteProfiles AP2/ERF domain profile. 136 192 IPR001471 GO:0003700|GO:0006355
Pste3g03274 464 SMART rav1_2 228 291 IPR001471 GO:0003700|GO:0006355
Pste3g03274 464 SMART rav1_2 136 198 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03274 Pste-Chr3 25336314 25340731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03274 120 311 AP2-EREBP Transcription Factor Family AT4G36920 81.538 1.08e-94 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Pste3g03274 AP2 9.4e-09 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03274 3 25336314 25340731 Pste3g03274 3 25336314 25340731 ECH
Pste3g03274 3 25336314 25340731 Pste1g02484 1 9151036 9155132 PCT