Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03244 GCAAAAGCTAAAGTAGTTGATAAAATGAAAAAGCAAGACCTAGCGCTGACTACGTGTATTATGATCACAAATCAGTATACACAGGGCATGGTGGAGGGAATAACAATCTTAGGCTAATTATGAGAGTTTCTAAGTTGTGATCGGTATGAATCTAAGTTGACTGCTATTAATTTCTTTTGGTCAACGAGGTCAATTTGCTTATGAACTTGAAAGAGGGGATATTCATGTGCATGATTAAAGAGGATGGGCAACATGGAGCTTGTGATTTCATCTTTCAGGTGTTTGTTTCTTCTTTGCGTATGTTTGGTGCTTGACTTAGTGCTCAAGGTTTCCGGCAATGCAGAAGGTGATGCTCTGAGTGTATTAAAGAACAATTTGATCGATCCTAGCAATGCTCTTCATAGTTGGGATTCTACTCTTGTCAATCCTTGCACATGGTTTCATGTTAGTTGCAACAATGACAATAGTGTGATCCGTGTTGATCTTGGAAACGCAAACCTTTCGGGTCAACTAGTTCCACAGCTTGGTCAGCTCCCAAATTTACAATATTTGGAACTTTATAATAATAAGATAACGGGGGAAATCCCAGAGGAGCTTGGAAGTTTGACAAATTTGGTGAGCTTGGATCTTTACATGAACAACCTTACTGGTCCCATTCCAAATGAATTCGCCAACCTTAAAACACTACGTTTCCTGCGTCTCAACAATAACAGCTTGTCAGGAAAAATTCCTATGGGGAAGGGTAACGGATATATTCTAGTCATTGCTGGAGGAGTTGCTCTGGGTGCTGCGTTGTTGTTTGCAGCCCCAGTAATTGCACTTGTTTATTGGAATAGAAGGAAGCAACAGGAACCGGATGATTATTTTGATGTTGCAGCTGATGAGGATACTCAAGACGAAAATCCTCGAGTTAACCTTAGTCAGCTTAAAAAGTTTTCTTTGCGTGAACTGCAAGTTGCAACAGATAACTTTGATGACAAAAACATTATTGGTAGAGGTGGATTTGGCAGGGTCTATAAAGGACGCTTAACAAATGGTGATCTTGTAGCAGTGAAGAAACTTAAAGACGAACGCATCCGGAGTGAGGGGAAGGAATTTCAAACAGAATTGGAAATTATCAGCTTGGCTGTGCATCGAAATTTGCTTCGCCTGCGTGGCTTCTGTATGACACCTACTGATCGCTTGCTAGTGTATCCTTTAATGGATAATGGAAGTCTAGATTCATGTTTACAAGAACGTTCGAAATCAAAACCACCACTTGAATGGCCAGTGCGGAAGCGTATTGCTCTAGGAGCTGCTAGAGGACTTGCTTATTTGCATGATCATTGTAACCCAAAGATTATTCATCGTGATGTCAAAGCTGCTAATATATTGTTGGATAAGGACTTTGAAGCAGTTGTAGGAGATTTTGGTTTAGCAAAGCTTATGGATTACAAAAATACTCATGTCACTACTGCTGTACGTGGTACACTTGGCCATATAGCACCCGAGTATCTCTCAACTGGAAAGTCTTCAGATAAGACTGATGTTTTTGGATATGGTGTAATGCTTCTTGAACTAGTAACTGGACAGAGAGCTTTTGATTTAGCACGACTGGCTAGTCATGATGAGGTTATGTTGTTTGAATGGGTGAAAACACTTATGAAAGACAAGAAATTGAAGGAACTGGTGGATCAAGATTTACAGGGAAATTATGATGAAAAGGAAGTAGAGGAGGTAATCCAATTGGCCTTGCTATGCACACAAAGTTCCTCTTGGGAAAGACCCACGATGTCTGAGGTGGAGAGAATGCTAGACGGTGAAGGTTTGGAAGAAAAATGGGATCAATGGTGGAAGAGAGAGGATACGATTCAACAAAATTTGAAACCCTTTAAAATCCCCACTGCTTATGACTCAACTTCAAATATTGAACCAGAACAACTGTCAGTTGACGCTCTGTCTGCACTGAAGAACAATTTGAGTGATCCTAACAATGTTTTTCAAAGTTGGAATTCTACCCATGTCACTCCTTGCTCATGGTTTCATGTTACTTGCAACAACGAATATAGCGTGACCCTATGTGCATATAGTGAAATGTTTTGTTTGGCTAGAGATCTCGGAAATCGAAACCTTTCTGGTCATCTTGTTCCACAGCTTGGTCAACTCGCAAATTTGGAATACTTTGATCTAGCGAATAACAACTTAACTGGAGATGTCCCACTCAATGGTTCTTTTTCACCTTTTACTCCAGCCAGTTTTTTGAATAATCCTTTATTGAGTTATAACAGCATTCCACAAAGTCATTCAGGTAATGGTAACCGTACTATTGAAGCCATTGCTATTGCAGTTGCTGTGGCACTGTTGCTTGCTACCCTCGTAATTGTACTTTGGAAAAGATGGAAGCCACAAGATATTTTCTTTGGAGATGCAGCTGAGCAGGATCTAGCAGTTAACCTTGGTCAGCTAAAAAGGTTTTCACTGCATGAACTGCAAGTCGCAACAGATAACTTTAATGACAAAAACATTCTTGGAAGAGGTGGATTTGGAAAGGTCTATAAAGGATGCTTAACAAATGGTGATCTTATTGCAGTAAAAAGACTTAGAGAAGAATGCATGCAAGGTGGGGAGATGCAATTTCAAACTGAAGTGGAAATTACCAGTATGGCTGTGCATCGAAATTTGCTTCGCTTGCGTGGTTTCTGTATGACACCTACTGAACGTGTGCTTGTGTATCCTTTTATGGTTAATGGAAGTGTAGCTTCATGTTTACGAGATCGTCTGGAATCACAACCACCACTTGAATGGCCAAAAAGGAAGCGCATTGCTCTAGGAGCTGCTAAGGGTCTTGCTTATTTGCATGATCATTGTGACCCAAAGATCATTCATCGTGATGTTAAAGCTGCTAATATATTATTGGATGAGGACTTTGAAGCTGTTGTTGGAGATTTTGGTTTAGCAAAGCTTTTGGATTACAAGGATACTCATGTTACTACAGCCTTATGCGGTACAATTGGCCATATAGCACCAGAGTATATCTCCTCTGGAAAATTTTCAGCGAAGACTGATACTTTTGGATATGGTGTGATGCTTCTTGAGCTAATAACTGGACAGAGGGCTTTGGATTTAGCACGACTAGCGAATGATGATGGTATCATGTTGCTTGATTGGGTGAAAAGACTTGTGAAAGACAAGAAATTGAAGGCATCGGTGGATGAAGATTTACAGGGAAATTATGATGAAAAGGAAGTAGAGGAGGCAATCCAAGTGGCCTTGCTATGCACACAAAGCTCTCCTTTGGAAAGACCCCAGATGTGTGAGGTGGTGAGCATGCTAGAGGGTGAAGGTAACTCTAAATATCATAAGATGTATCGAATATGGTGGACCATTAATGGTCCTGATGAAATGGAGAGGCAAGACCAAGACCTAGCGCTGACTACGAGTGATGCTCTGTTTGCACTGAAGAATAGTATGAGTGATCCTAACAGTGTTCTTCAAAGTTGGGATTCTACCCTTGTCACTCCTTGCACATGGTTTCATGTTACTTGCAACAATGAAAATAGTGTGACCCGTGTTGATCTTGGAAGTGCAAACCTTTCTGGTCAACTTGTTTCACAGCTTGGTCAACTCCCAAATTTGCAGTACTTGCGTCTCAACAATAACACCTTGTTTGGAAAGATTCCTATGCGTTTGACCACTGTTAATTCGCTGCAAGTGCTTGATTTATCGAACAACAACTTAACTGGAGATGTCCCAGTCAATGGTTCGTTTTCAAGTTTTACTCCCATCAGTTTTAGGAATAATCAATATTTGAATAATGCTACCATTCCAACTCCACCAGCTGCTCCAAATCCATCAAGTTCTTCAGGTAATGATAACGGTGTTCTTGGAGCCATTGCTGGGGGAGTAGCTGTGGGTGCTGCACTGTTGTTTGCTGCCCCAGTAATTGCACTTGTTTATTGGAAAAGAAGGAAGCCACAGGAGTTTTTCGTTGATGTTGCAGCTGAGGAGGATCCTGAAGTTCATCTTGGTCAGCTAAAAAGGTTTTCACTGCGTGAACTGCAAGTTGCAACAGATAGCTTTAATAACAAAAACATTCTTGGAAGAGGTGGATTTGGCAAGGTTTATAGAGGACGGTTAACAAATGGTGATCTTGTAGCAGTAAAAAGACTTAAAGAGGAACGCACCCAAGTTGGGGAGATGCAATTTCAAACTGAAGTGGAAATGATCAGCATGGCTGTGCATCGAAATTTGCTTCGCCTGCATGGTTTCTGCATGACACCTACGGAACGCGTTCTTGTCTATCCTTTCATGGTTAATGGAAGTGTGGCTTCATGTTTACGAGATCGTCCGGAATCACAACCACCACTTGAATGGCCAAAAAGGAAGCGCATTGCTCTAGGAGCTGCTAGGGGTCTTGCTTATTTGCATGATCATTGTGACCCAAAGATCATTCATCGTGATGTTAAAGCTGCTAATATATTATTGGATGAGGACTTTGAAGCTGTTGTTGGAGATTTTGGTTTAGCAAAGCTTATGGATTACAAGGATACTCATGTTACTACTGCTGTTCGCGGTACGATTGGTCATATAGCACCAGAGTACCTCTCAACTGGAAAGTCTTCGGAAAAGACTGATGTTTTTGGATATGGTGTGATGCTTCTTGAACTAATAACTGGACAGAGAGCCTTTGATTTAGCACGACTCGCCAATAATGATGATGTCATGTTGCTTGATTGGGTGAAAGCATTACTGAAAGACAAGAGGTTGGAGACACTGGTAGATGCTGATTTAGAGGGAAATTATGAGGCGACAGAAGTAGAGGAGGTAATCCAAGTGGCCTTGCTATGCACACAAAGCTCCCCTGTGGAAAGACCAAAGATGTCTGAGGTGGTGAGAATGTTAGAGGGTGAAGGTTTGGCAGAAAAATGGAATAAATGGTGGCAGAAAGAGGATATGATCCAACAGAATTTCGACCCCTCCAATCTCCATGCTCCTTATTGGCCATTATTAGATTCAACTTCAAATATTACTCCAGATGAACTGTCAGGTCCAAGATGATCTTTGAACACAGAAACATTTTTAATAGTCAAAAGTTTAGCAAAGAGACGTTTGTAGAAACAAAAAGTTGATGAAAGTAAGTAGTTTTTTAAATTATACTGTACTAGACACAAATTATAGTATGTCAATCATGCTATTGAATTGATAGAATGAGAATAAATGTGTACCGAATTGACATTCATATCCA 5224 0.4064 MGNMELVISSFRCLFLLCVCLVLDLVLKVSGNAEGDALSVLKNNLIDPSNALHSWDSTLVNPCTWFHVSCNNDNSVIRVDLGNANLSGQLVPQLGQLPNLQYLELYNNKITGEIPEELGSLTNLVSLDLYMNNLTGPIPNEFANLKTLRFLRLNNNSLSGKIPMGKGNGYILVIAGGVALGAALLFAAPVIALVYWNRRKQQEPDDYFDVAADEDTQDENPRVNLSQLKKFSLRELQVATDNFDDKNIIGRGGFGRVYKGRLTNGDLVAVKKLKDERIRSEGKEFQTELEIISLAVHRNLLRLRGFCMTPTDRLLVYPLMDNGSLDSCLQERSKSKPPLEWPVRKRIALGAARGLAYLHDHCNPKIIHRDVKAANILLDKDFEAVVGDFGLAKLMDYKNTHVTTAVRGTLGHIAPEYLSTGKSSDKTDVFGYGVMLLELVTGQRAFDLARLASHDEVMLFEWVKTLMKDKKLKELVDQDLQGNYDEKEVEEVIQLALLCTQSSSWERPTMSEVERMLDGEGLEEKWDQWWKREDTIQQNLKPFKIPTAYDSTSNIEPEQLSVDALSALKNNLSDPNNVFQSWNSTHVTPCSWFHVTCNNEYSVTLCAYSEMFCLARDLGNRNLSGHLVPQLGQLANLEYFDLANNNLTGDVPLNGSFSPFTPASFLNNPLLSYNSIPQSHSGNGNRTIEAIAIAVAVALLLATLVIVLWKRWKPQDIFFGDAAEQDLAVNLGQLKRFSLHELQVATDNFNDKNILGRGGFGKVYKGCLTNGDLIAVKRLREECMQGGEMQFQTEVEITSMAVHRNLLRLRGFCMTPTERVLVYPFMVNGSVASCLRDRLESQPPLEWPKRKRIALGAAKGLAYLHDHCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDYKDTHVTTALCGTIGHIAPEYISSGKFSAKTDTFGYGVMLLELITGQRALDLARLANDDGIMLLDWVKRLVKDKKLKASVDEDLQGNYDEKEVEEAIQVALLCTQSSPLERPQMCEVVSMLEGEGNSKYHKMYRIWWTINGPDEMERQDQDLALTTSDALFALKNSMSDPNSVLQSWDSTLVTPCTWFHVTCNNENSVTRVDLGSANLSGQLVSQLGQLPNLQYLRLNNNTLFGKIPMRLTTVNSLQVLDLSNNNLTGDVPVNGSFSSFTPISFRNNQYLNNATIPTPPAAPNPSSSSGNDNGVLGAIAGGVAVGAALLFAAPVIALVYWKRRKPQEFFVDVAAEEDPEVHLGQLKRFSLRELQVATDSFNNKNILGRGGFGKVYRGRLTNGDLVAVKRLKEERTQVGEMQFQTEVEMISMAVHRNLLRLHGFCMTPTERVLVYPFMVNGSVASCLRDRPESQPPLEWPKRKRIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANNDDVMLLDWVKALLKDKRLETLVDADLEGNYEATEVEEVIQVALLCTQSSPVERPKMSEVVRMLEGEGLAEKWNKWWQKEDMIQQNFDPSNLHAPYWPLLDSTSNITPDELSGPR 1597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03244 1597 FunFam Somatic embryogenesis receptor-like kinase 1 320 537 - -
Pste3g03244 1597 FunFam Somatic embryogenesis receptor-like kinase 1 826 1038 - -
Pste3g03244 1597 ProSitePatterns Protein kinases ATP-binding region signature. 249 272 IPR017441 GO:0005524
Pste3g03244 1597 ProSitePatterns Protein kinases ATP-binding region signature. 755 777 IPR017441 GO:0005524
Pste3g03244 1597 SUPERFAMILY L domain-like 1060 1178 - -
Pste3g03244 1597 FunFam Leucine-rich repeat receptor-like kinase 1057 1184 - -
Pste3g03244 1597 SUPERFAMILY Protein kinase-like (PK-like) 222 517 IPR011009 -
Pste3g03244 1597 SMART LRR_typ_2 634 659 IPR003591 -
Pste3g03244 1597 SMART LRR_typ_2 97 121 IPR003591 -
Pste3g03244 1597 SMART LRR_typ_2 1145 1170 IPR003591 -
Pste3g03244 1597 Gene3D Ribonuclease Inhibitor 1057 1193 IPR032675 -
Pste3g03244 1597 Gene3D Ribonuclease Inhibitor 561 687 IPR032675 -
Pste3g03244 1597 Gene3D Ribonuclease Inhibitor 31 169 IPR032675 -
Pste3g03244 1597 SUPERFAMILY Protein kinase-like (PK-like) 1252 1547 IPR011009 -
Pste3g03244 1597 ProSitePatterns Serine/Threonine protein kinases active-site signature. 366 378 IPR008271 GO:0004672|GO:0006468
Pste3g03244 1597 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1395 1407 IPR008271 GO:0004672|GO:0006468
Pste3g03244 1597 ProSiteProfiles Protein kinase domain profile. 243 530 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03244 1597 FunFam Somatic embryogenesis receptor-like kinase 1 1349 1567 - -
Pste3g03244 1597 Pfam Leucine rich repeat 98 158 IPR001611 GO:0005515
Pste3g03244 1597 Gene3D Phosphorylase Kinase; domain 1 718 825 - -
Pste3g03244 1597 Gene3D Phosphorylase Kinase; domain 1 212 318 - -
Pste3g03244 1597 Gene3D Phosphorylase Kinase; domain 1 1241 1348 - -
Pste3g03244 1597 SUPERFAMILY L domain-like 35 167 - -
Pste3g03244 1597 FunFam Somatic embryogenesis receptor kinase 1 1241 1348 - -
Pste3g03244 1597 FunFam Somatic embryogenesis receptor kinase 1 210 319 - -
Pste3g03244 1597 SUPERFAMILY L domain-like 563 658 - -
Pste3g03244 1597 Pfam Protein kinase domain 244 513 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03244 1597 Pfam Protein kinase domain 1273 1544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03244 1597 Pfam Protein kinase domain 750 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03244 1597 ProSiteProfiles Protein kinase domain profile. 1272 1559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03244 1597 ProSitePatterns Serine/Threonine protein kinases active-site signature. 872 884 IPR008271 GO:0004672|GO:0006468
Pste3g03244 1597 ProSitePatterns Protein kinases ATP-binding region signature. 1278 1300 IPR017441 GO:0005524
Pste3g03244 1597 ProSiteProfiles Protein kinase domain profile. 749 1035 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03244 1597 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 15 527 - -
Pste3g03244 1597 SMART serkin_6 749 1023 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03244 1597 SMART serkin_6 1272 1546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03244 1597 SMART serkin_6 243 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03244 1597 SUPERFAMILY Protein kinase-like (PK-like) 730 1024 IPR011009 -
Pste3g03244 1597 FunFam Somatic embryogenesis receptor kinase 1 718 825 - -
Pste3g03244 1597 Gene3D Transferase(Phosphotransferase) domain 1 1349 1566 - -
Pste3g03244 1597 Gene3D Transferase(Phosphotransferase) domain 1 320 537 - -
Pste3g03244 1597 Gene3D Transferase(Phosphotransferase) domain 1 826 1037 - -
Pste3g03244 1597 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Pste3g03244 1597 Pfam Leucine rich repeat N-terminal domain 562 598 IPR013210 -
Pste3g03244 1597 Pfam Leucine rich repeat N-terminal domain 1060 1095 IPR013210 -
Pste3g03244 1597 FunFam Somatic embryogenesis receptor kinase 1 30 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03244 Pste-Chr3 25106721 25141495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03244 560 654 Receptor kinase-like Gene Family AT1G71830 55.789 8.36e-24 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Pste3g03244 Pkinase 4.8e-44 CL0016