Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03240 TAGCGTTTTGTGCGTTGAACGTCTCGTTTGGTTTGGGTGAGAGTGCAGAGTAACTGCCTGTGCCACAAACCTTAACCTTAACTTTGTGAGTTGCTTATTGTGCATGCTGAGGAGAAAAGCAAAACAATGTCCGTAATCGACATTCTCTTCCGGGTGGACAACATATGTCAGAAATATGAGAAATACGACATCGACAAGCAGCGAGAGCTGAACGCGTATGGGGACGACGCCTTTGCTAGGCTCTACGCTGCCGTGGAATCAAGCATTCAAACCGCTCTCAATAAATCGGAGCTTGCTCTGACGGAGAGCAACAGGGCAGCTGCTGCGGCTATGAATGCAGAGGTTCGTCGAACGAAGGCTAGGCTGATGGACGAGGTTCCTAAACTCAGGAAATTGATGCAGAAGAAGGTTAAAGGTGTGACGAAAGAGGATATGGGCATTCGTCAGGATCTTGTTCTGCTATTGCCCGAGAGAATCCAAGCAATACCAGATGGCATTACTTGTGCTGCTGCTATGCAAACTCCCTCTACCTCCTCTCACCCCCATATCAACTTTGATTCATCAGATGCCCATCTTGGCGCTGACTATTTCACTCAAACTCAACAATCCAATCAGTTTCGCCATGATTATGAGATGCGCAGGATCAAACAGGACGAAGGACTTGATATCATATCAGAGGGATTGGATACATTAAAGGATCTTGCCAAAGATATTAATGAGGAATTGGATCGACAAGTTCCTTTAATGGATGAAATTGACGCTAAGGTGGATAGGGCCTCAGCTGATGTCAGAAACACCAACTTAAGGCTGAAGAAAACTCTCACTGAGATAAGGTCCAGTCGAAATTTCTGCATCGACATCATTCTGATCTGTGTTCTCCTTGGAATCGTTATGTATTTGTACAATGCTCTGAGGTGACTTGATCTTGAATTATTTCCCTTGTTGCAACTGGTGTTCGGTCGTGATATGATATTACATCCTCGCGCTACTGGGGGGTTTCTTTATAACTTTCTAATATTACATCATGATTCAGCTAATGGGGAATGGCAACATATATTATTCCGATGGACTTTCTAATTCTTTGATATATTAATGGCTACTTTGATATGTCATTACTCGTTTCTAC 1126 0.4369 MSVIDILFRVDNICQKYEKYDIDKQRELNAYGDDAFARLYAAVESSIQTALNKSELALTESNRAAAAAMNAEVRRTKARLMDEVPKLRKLMQKKVKGVTKEDMGIRQDLVLLLPERIQAIPDGITCAAAMQTPSTSSHPHINFDSSDAHLGADYFTQTQQSNQFRHDYEMRRIKQDEGLDIISEGLDTLKDLAKDINEELDRQVPLMDEIDAKVDRASADVRNTNLRLKKTLTEIRSSRNFCIDIILICVLLGIVMYLYNALR 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03240 263 CDD SNARE_Qc 174 230 - -
Pste3g03240 263 PANTHER SYNTAXIN 23 250 IPR045242 -
Pste3g03240 263 SUPERFAMILY SNARE fusion complex 164 230 - -
Pste3g03240 263 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 169 231 IPR000727 -
Pste3g03240 263 Gene3D - 169 230 - -
Pste3g03240 263 ProSitePatterns Syntaxin / epimorphin family signature. 175 214 IPR006012 GO:0005484|GO:0006886|GO:0016020
Pste3g03240 263 SMART tSNARE_6 165 231 IPR000727 -
Pste3g03240 263 FunFam Putative syntaxin-71-like 169 230 - -
Pste3g03240 263 Pfam SNARE domain 206 255 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03240 Pste-Chr3 25069395 25071996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03240 1 263 SNARE and Associated Proteins AT3G09740 63.296 1.20e-125 356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03240 3 25069395 25071996 Pste3g03240 3 25069395 25071996 ECH