Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03232 TATTCCTTATCTTTTTCAGCAACCAAAACCAACTTCACAAACACGGCAATGCATGCATTTGGCATCCATTTGATTGTTCTTTACTCTCTGTTGAGTTTTGTATCCTCAGATATTAACCTTGTAAAATATAGCTTTCTGCAAGCAGGCTTGAAAATGGATGGAGCTTCATATGTGAGGCCAAATGGCATACTTACCTTGACAAATGATTCTGCAAAAATCCTTGGCCATGCATTCTATCCATCTCCCTTGCCCTTCAAATCTAGCAAAAACAAATCCATTGTTGCAACCTTCAGCACTACCTTTGTGTTTTCCATTGTTCCTAAGTACCCAGATCTTGGTGGACATGGTTTTGCTTTCGTCCTAATATCTACCAATGAACCAAAAGGGTGCCTTATAAATCAATATTTAGGCCTCCCAAATGTGACAAGTAGTCAAGAATTCTCAACCCGGTTCCTAGCCATAGAGTTTGACGGGGTACAGAACCTTGAGCTTCAAGACATCAATGATAATCACGTGGGGATAGATATATCCAACCTCATCTCTAACATATCTAAGTCGGCAGCATACTACTTATCAGATCACAGCAAGAACATTTCCATCAGTCTGAAGAATGGAAAACCCATTCAAGCATGGGTTGATTACAATGAAGGGGAGATGTTGATAAATGTCACAGTCTCTCCTTTTGGCATGCCAAAGCCACTTATCCTTGGTTTTTCTGCTTCGAACGGTTTGTTGATTGCTGAGCATAATATACATGGTTGGAGTTTTAAAATTGGAGAAGCAGCACAAGAGCTAGATAAATCAGCTGTTCCACTTATTGGGTCAAGTACTTCTAGTAAAGTAGTGCACAAAAAACACTTTTCAGTAGGTATCACTTTAGCAGGTGCATCTCTTTTTATCTTAACAATTATAGGAGCTCTTCATGTCCTGCGCAGATCAAGAAATGGGGACGAGATTTTAGAAGACTGGGAACTTGAATTTGCCGCCCGTAAATTTAAATATTCTGAACTACATTCAGCTACAGGAAGGTTTGGAGACAAAAACCTTCTTGGGTATGGAGGATTTGGTAAAGTCTACAAAGGAATACTCCCAAGCACAGGACTAGAAGTAGCTGTCAAGCGAGTTGCTCCTAATTCAAGACAGGGAATCAGAGAATTTGTTGCAGAAATAACAAGCATGGCACAACTAAAGCATACAAATTTGGTGCAGTTACATGGGTGGTGCAGGAAGCAGGATGAACTCCTCATTGTTTACGACTACATACCAAATGGGAGCCTAGACAAGCTTCTTTTTGAAAATGATCAACAAAAGAAGAAATTATTAACTTGGAATCAAAGATACAAGATCATTACCGGTGTTGCACAAGGACTGCTGTATCTCCATGAAGAATGTGAACTGCAGGTTGTTCACAGAGATGTAAAGCCAAGCAATGTCTTGATCGATGCAGATCTCCAACCAAAGCTTGGTGATTTTGGTCTTGCAAGGACTTATGAGCATGGAATCAATCCACAGACAACAAATGTTGTGGGAACACTAGGGTACATGGCCCCTGAGCTCACAAAGACTGGGAAAGCAAAAACAAGCACAGATGTATATGGGTATGGCATACTCATTTTGGAAGTAGCATGTGGAAGGAGGCCAATAGATTCCCAAAAGAATCCTGAGGAACTGGTATTGGTAGACTGGGTTAGAGAATTATATCACCAAGGGGTGATCAGCAGGGCTATTGACCCCAGTTTAGATGAGTATGACAAAGATGAAGCTCAGCTTGTGCTTAGCCTTGGGTTGCTTTGCACTCATCCCAATCCTGATTACAGGCCTAATATGAGAAGGATTGTTCAGTTCCTTCTGGGAGAAACCATCCTTCCTCCGCTTCCTCCTGACATTCACTGTGAATGTCCAAGACCAATAAAAAAATGCATATACAACTTTCCAGATGATTCATGCCCTTCAAGTTCTATGGTGTCTTCATCAAAATATTGCAGTCTTACCAACTTTGATGAGAAAAGAATGTTAAAACACACAATGTATTCTAGAAGCACAGGAACTGACTTGAGACTACCTGAGGAAAAAAATATTCAGTTAACTACAGCAAAGAGTCCTCATAAAAAAAATCTATTCATGTTTCTTCTATGA 2136 0.4022 YSLSFSATKTNFTNTAMHAFGIHLIVLYSLLSFVSSDINLVKYSFLQAGLKMDGASYVRPNGILTLTNDSAKILGHAFYPSPLPFKSSKNKSIVATFSTTFVFSIVPKYPDLGGHGFAFVLISTNEPKGCLINQYLGLPNVTSSQEFSTRFLAIEFDGVQNLELQDINDNHVGIDISNLISNISKSAAYYLSDHSKNISISLKNGKPIQAWVDYNEGEMLINVTVSPFGMPKPLILGFSASNGLLIAEHNIHGWSFKIGEAAQELDKSAVPLIGSSTSSKVVHKKHFSVGITLAGASLFILTIIGALHVLRRSRNGDEILEDWELEFAARKFKYSELHSATGRFGDKNLLGYGGFGKVYKGILPSTGLEVAVKRVAPNSRQGIREFVAEITSMAQLKHTNLVQLHGWCRKQDELLIVYDYIPNGSLDKLLFENDQQKKKLLTWNQRYKIITGVAQGLLYLHEECELQVVHRDVKPSNVLIDADLQPKLGDFGLARTYEHGINPQTTNVVGTLGYMAPELTKTGKAKTSTDVYGYGILILEVACGRRPIDSQKNPEELVLVDWVRELYHQGVISRAIDPSLDEYDKDEAQLVLSLGLLCTHPNPDYRPNMRRIVQFLLGETILPPLPPDIHCECPRPIKKCIYNFPDDSCPSSSMVSSSKYCSLTNFDEKRMLKHTMYSRSTGTDLRLPEEKNIQLTTAKSPHKKNLFMFLL 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03232 711 SUPERFAMILY Concanavalin A-like lectins/glucanases 38 260 IPR013320 -
Pste3g03232 711 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Pste3g03232 711 FunFam L-type lectin-domain containing receptor kinase S.4 421 628 - -
Pste3g03232 711 Pfam Protein kinase domain 346 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03232 711 CDD lectin_legume_LecRK_Arcelin_ConA 47 258 IPR001220 GO:0030246
Pste3g03232 711 Pfam Legume lectin domain 47 269 IPR001220 GO:0030246
Pste3g03232 711 CDD STKc_IRAK 350 616 - -
Pste3g03232 711 PANTHER - 53 626 - -
Pste3g03232 711 SUPERFAMILY Protein kinase-like (PK-like) 328 651 IPR011009 -
Pste3g03232 711 SMART serkin_6 344 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03232 711 Gene3D - 34 266 - -
Pste3g03232 711 Gene3D Phosphorylase Kinase; domain 1 328 420 - -
Pste3g03232 711 Gene3D Transferase(Phosphotransferase) domain 1 421 621 - -
Pste3g03232 711 ProSitePatterns Protein kinases ATP-binding region signature. 350 373 IPR017441 GO:0005524
Pste3g03232 711 FunFam receptor-like protein kinase FERONIA 311 420 - -
Pste3g03232 711 ProSiteProfiles Protein kinase domain profile. 344 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03232 Pste-Chr3 25007279 25009887 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03232 37 627 Receptor kinase-like Gene Family AT3G55550 45.663 0.0 555
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pste3g03232 Pkinase 1.5e-51 CL0016