Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03220 ATGGATATAATGATTTGGATGAAAGAACCACGTATGAATGGGATTGTCCGCATCACTTGTAGTGACTGCTATCTGGGAAGTGGGATCTCTTCTCTTCAAATACTAATGGCTGAGGCTTTGTTCACTTTCAATGGTTCTCTTGGAGGTCCACAGCAATTCGGATGCAGCATTGTGAAATATCCATGTCAAGTGCAATGGCCATGTCTTGACTGCTATAAACTAAAAGATCCAGGTAGGATAACAACAAAGAAAGATGGGAATAAAGACATTCCAACATTTTCACCTCTTCAAGAAACTCAAGTTAAAAAGCCAGGAGGAAGAATGACTGCCGCCATAATTGGTAGCGTTATTGCTGCCTTAGTTGTCATTGTCATTTTGGTGATTGTCTATATCTGCTTGATGCGTGTTCAAAGATTTATGAGACAAACATCTGAGATTGCTTCTTCTATGCCATCTCCCACAGTCGAGATGGGAAGAGTTGACAATACGCAGCTTGTTAATTCTTTCTCTCCACATTATATGCAGAACACAAAACAGTTAACAATTTTGGAACTAGAACAAGCTACACGAAATTTCAGTCATAGCAATATTATTGGTGAAAGCGGATTTGGTTTTGTATACAAGGGCTTGCTTCAAGATGGATCTATTGTCGCTATAAAAAGGCGACTATTTGCTTTGACACAGGATTTCGTCCTTGAGGCGAGGCAGATAGCTCATATTCACCACATTCATCTTGTCAAGCTTATAGGCTATTATGAAGATAGCTATCAACAACTACTCGTGTATGAATATCTCCCTAACGGCAATGTAGGGAGTCACCTATATGACAGTGAAGGTTTACCTATTGGAAGACTAGACTTGTGGCGAAGGTTGTCTATTGCTTTAGGTGCGTCCAAAGGAGTGGAACATCTTCACAGTTTGGTCCCTCCTTTGGTTCACACCAATTTTAGAACAAGAAATGTGCTGTTAGATGAGAATTATACGGCCAAGGTTTCTGATTATGGATTCTGCAAATTGCAAACAAAGGTTGATGAGGCTGGCTCATCTTCAAATGTAGACTGCTTTATTGACCCAGAGTTGAGCTATCCACAAAACTTTTCAGAGACGAGTGATGTATTCAGTTTCGGAGTCTTCTTACTAGAATTGCTTAGCGGCTGTGAAGCACATAACAAAAACACGTCACACCCAGATGAAAATATAGTATTTCAGGCTAAAAACAGCGTTGACTGGGACAAGTTTGTTGACATAACGCTGGGAGAGCAAGAAAAGCATGGTGCTGGAGGAATGATGAAGTTGGCGTTGCTATGTGTGGATGTGACTAGTAGAAGACCCTCAATGGCGCAAATTGTGCAAGAGCTAGAGCGGATTCAAAGAGAAATTGCTCCTATGTATTCTCGATTCAACCACGAGATTGGTGCCGTTACTCTTGGTAGTGAACTATTTCAATAA 1449 0.4072 MDIMIWMKEPRMNGIVRITCSDCYLGSGISSLQILMAEALFTFNGSLGGPQQFGCSIVKYPCQVQWPCLDCYKLKDPGRITTKKDGNKDIPTFSPLQETQVKKPGGRMTAAIIGSVIAALVVIVILVIVYICLMRVQRFMRQTSEIASSMPSPTVEMGRVDNTQLVNSFSPHYMQNTKQLTILELEQATRNFSHSNIIGESGFGFVYKGLLQDGSIVAIKRRLFALTQDFVLEARQIAHIHHIHLVKLIGYYEDSYQQLLVYEYLPNGNVGSHLYDSEGLPIGRLDLWRRLSIALGASKGVEHLHSLVPPLVHTNFRTRNVLLDENYTAKVSDYGFCKLQTKVDEAGSSSNVDCFIDPELSYPQNFSETSDVFSFGVFLLELLSGCEAHNKNTSHPDENIVFQAKNSVDWDKFVDITLGEQEKHGAGGMMKLALLCVDVTSRRPSMAQIVQELERIQREIAPMYSRFNHEIGAVTLGSELFQ 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03220 482 Gene3D Transferase(Phosphotransferase) domain 1 265 471 - -
Pste3g03220 482 ProSiteProfiles Protein kinase domain profile. 192 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03220 482 Pfam Protein tyrosine and serine/threonine kinase 195 452 IPR001245 GO:0004672|GO:0006468
Pste3g03220 482 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 118 456 IPR047117 -
Pste3g03220 482 SUPERFAMILY Protein kinase-like (PK-like) 170 462 IPR011009 -
Pste3g03220 482 Gene3D Phosphorylase Kinase; domain 1 155 264 - -
Pste3g03220 482 FunFam receptor-like serine/threonine-protein kinase NCRK 166 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03220 Pste-Chr3 24865679 24870754 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03220 105 458 Receptor kinase-like Gene Family AT5G49780 34.667 2.20e-51 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Pste3g03220 PK_Tyr_Ser-Thr 2.8e-30 CL0016