Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03216 ATGGCTTCTTGTACATTAGGATCTAGTAGCAATGACATGCCAATTAACCATATTGAGATTCTTGTACATTCTAATGATATAGAAGCAAAGCCTAGCCAAGACACAGAAGAAAACAATATTGAGTACTCTCGCAGGGCACAGTGGCTTCGGGCAGCAGTGTTGGGAGCCAAACATGGGTTGGTCTCGGTCACCTTAGTGATGATGGGTGTTGAAGCTTTGAATGAAGACATCACAACCATGCTTCTTGCTGGCTTTGCAGGACTTGTTGCAGGGGCATGCAGTATGCCAATTGAAGAGTCTGCATCAATAGACACTCACAGAGACACCGAGATAGCTCAAATGAAAGTCCATCACAACAAACATAAAGAAGTGGAAGAAGATGATAAACTGCTTAACCCTTTTCAGGCATCCATAGCATCGGCATTTGGATTTTCTATTGGTGCTATGTTACCACTCATAGCAGCTATTTTTATAATGGACTATAAGATCAGGCTGCTAGTTGTTGTTGCTGTGGCCATCTTGGCAATGTTAGTATTTGGAGGGGCAGGAATAGTACTTGGTAAAAATAAAACTCCAGTGGAAAGGACTTGGGATCAGAGTGCTGATTGGAGGTTGGATGACTATGGCTATTACTTTTGGCTTTGA 645 0.4248 MASCTLGSSSNDMPINHIEILVHSNDIEAKPSQDTEENNIEYSRRAQWLRAAVLGAKHGLVSVTLVMMGVEALNEDITTMLLAGFAGLVAGACSMPIEESASIDTHRDTEIAQMKVHHNKHKEVEEDDKLLNPFQASIASAFGFSIGAMLPLIAAIFIMDYKIRLLVVVAVAILAMLVFGGAGIVLGKNKTPVERTWDQSADWRLDDYGYYFWL 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03216 214 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 30 189 IPR008217 GO:0005384|GO:0030026
Pste3g03216 214 Pfam VIT family 119 189 IPR008217 GO:0005384|GO:0030026
Pste3g03216 214 Pfam VIT family 49 127 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03216 Pste-Chr3 24847244 24847888 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03216 23 196 Nodulin-like Gene Family AT3G43660 48.851 3.01e-50 160