Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03214 AGGTTTTGAAGGGAATGAGAGGAGAAAGAGGGAGAAAGAAAATATAAGGGAGTGGGGACCACGGAAGGGGTAATAGGGCGGCAAAAAAAAAAAGAAGAGAAGAAGGGAATGATGTGATGGTGGAGGATAGGTTAACAAGAGTCATCCTTTAAATAGGATAGCATGTTGATGGGAGTGAAAGGGCAAGGAGAATAGTAATGGCGAAAGAGGTTGAACAGGTGACAGAGCAAGGTGAGTACTCGGCGAAGGACTACCAAGATCCTCCTCCGGCGCCGTTGATAGACCCAGATGAGCTGAGCAAGTGGTCCTTGTACAGAGCAGCCATAGCAGAGTTCATAGCAACCCTCCTCTTCCTTTACATAACCGTGTTAACCATTATAGGGTACAAGAGACAGAGTGACACCAGAATTGAAGGTAACAGCGAGTGTGACGGAGTGGGCATTTTGGGCATAGCCTGGGCCTTCGGTGGCATGATCTTCATCCTTGTTTACTGCACGGCGGGTATATCTGGGGGACACATAAACCCTGCGGTGACATTCGGGTTGTTCTTGGGAAGGAAGGTGTCGCTTGTGAGGGCGTTGCTGTACATGATAGCCCAGTGTGCGGGTGCAATATGCGGTGCTGGCTTGGCCAAAGGGTTTCAAAAGTCCTACTACAACAGGTACGGAGGTGGGGTTAACCTTGTAAGCGATGGCTACAACAAAGGTACCGCTTTGGGTGCTGAGATCATTGGTACCTTCGTTCTTGTCTACACCGTTTTCTCCGCCACTGATCCTAAGAGAAGCGCCAGAGACTCTCATGTTCCTGTATTGGCGCCTCTTCCCATTGGCTTCGCCGTCTTCATGGTTCACTTGGCTACAATCCCTGTCACCGGCACCGGCATTAACCCCGCTAGGAGCTTCGGTCCAGCTGTTATCTTCAACAACGACAAAGCCTGGGACCACCAATGGATTTACTGGGTTGGACCCTTTCTCGGAGCCGCCGCCGCCGCATTCTACCACCAATACATTCTCCGAGCTGCCGCCATCAAAGCTCTTGGATCCTTCAGGAGCAACGCTTAATCTTCCATCTCCTATGTCTCCCAACACAATAACACTGTTTCAGTTCAAGTCTGTCCTTTTGGCTTTTTGGGGAAAGCCAAATACTTTGGCCTCTCCTCTCCTCTCCTCTCCAATTTGTAGATAAGGATGCTTTCATTTATGTCAAGGGTGTATTTCTATCCCTTTTGTTTTTTATTTTTTCTCTTCCCCCTCATGTCTTTACTTTTCTATAATCTGCTGCATCCTTCGCCAACTTTTCTTTTCTTTTTGCCTCATTCTTCCCTAAGTGCTCTATTACTATTTTCATCTTCTTCGCATAAACTTTACCACTTGTTGCCTGCCTCTATTCTGAATGCCTTATCAATTATCATCACCCTTGACTTTAGCAATCAACTTTTCCAC 1442 0.475 MAKEVEQVTEQGEYSAKDYQDPPPAPLIDPDELSKWSLYRAAIAEFIATLLFLYITVLTIIGYKRQSDTRIEGNSECDGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLVRALLYMIAQCAGAICGAGLAKGFQKSYYNRYGGGVNLVSDGYNKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGPAVIFNNDKAWDHQWIYWVGPFLGAAAAAFYHQYILRAAAIKALGSFRSNA 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03214 287 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 7 276 IPR034294 -
Pste3g03214 287 PRINTS Major intrinsic protein family signature 126 145 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste3g03214 287 PRINTS Major intrinsic protein family signature 211 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste3g03214 287 PRINTS Major intrinsic protein family signature 251 271 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste3g03214 287 PRINTS Major intrinsic protein family signature 40 59 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste3g03214 287 PRINTS Major intrinsic protein family signature 175 193 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste3g03214 287 PRINTS Major intrinsic protein family signature 89 113 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste3g03214 287 Gene3D Glycerol uptake facilitator protein. 25 287 IPR023271 -
Pste3g03214 287 FunFam Probable aquaporin PIP1-2 25 287 - -
Pste3g03214 287 Pfam Major intrinsic protein 32 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste3g03214 287 NCBIfam MIP family channel protein 44 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste3g03214 287 SUPERFAMILY Aquaporin-like 32 273 IPR023271 -
Pste3g03214 287 CDD MIP 40 271 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste3g03214 287 MobiDBLite consensus disorder prediction 1 25 - -
Pste3g03214 287 ProSitePatterns MIP family signature. 107 115 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03214 Pste-Chr3 24843716 24845340 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03214 1 285 Major Intrinsic Protein MIP AT5G60660 77.895 5.79e-166 460
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03214 3 24843716 24845340 Pste3g03214 3 24843716 24845340 ECH
Pste5g01906 5 12034875 12037634 Pste3g03214 3 24843716 24845340 ECH
Pste4g02173 4 15792373 15792950 Pste3g03214 3 24843716 24845340 ECH
Pste3g03214 3 24843716 24845340 Pste1g02620 1 10062733 10064133 PCT