Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03208 CGAGCCTTCCCTTCCATTCTTTTATTAGAAGCTGGTTCTGAGTAGCTAAACAAATCAGCTTTTGTAGTTCACACTATAGTTTGTCTGGTGTGCTTCTTACCCTACACATTTTACATCCAACTCTTGTTTCAGGCTCTCTAGTTTCTATAAGCAAGGTTCTTGAATTGTGAGAGCCTCCTGTATTATTAAATTATTATATATTACAATACTTGGAATTGCGGTTTATGTTTGATTTGATGTTGTTATTAAATTTATAGGCTTTCTGGTTCTACGGTCGGAGAGATGTTGTTTCTCTTGCTTGTAAATTGAAGTGCATTAGTGGCTATTCCTCTTTCCTTTTAGTTATGAGTTGTTATTTCTGTATTTCGTCCTTGATTGTTGTTTTTTTATTTAAGTATTTCTATTTCTATTTTTTCTAAGTTCATCGTATTTCGTTCCGAGTATATTAAAGCGATTCATGATGTTGCTTTGGTTTTGGTTTGGGAGATGTTGAATTCGTTCCTTTTCTGGTAAATCTGTTTTTGATTTCTTCTGCTTTGGAATCTTGCCTTCTAAGCTTACTTCTTTTTTGGTCAATATATTCTTTTTCTGTGTGGAGGATATTTACATGAAAGTTGCTTGGGCTGTGCCTCATTTAGAATTGAGATATTCCACTATTGATGCTATAACATAACCATGTGTAGACATGATGATACAAAATATTTTGGGAATTGTTAGACATGAAGGGCTTATAATACGACACATAAAATTAACCTAAAATGTTTTTCAAAAGTAAGTTAGAATCGTAATGAGTGAGGTTGTCTTTTGACTAAACAGCCTCTTTGGTTTGATTGGAAGAAAAGTTTAAAAAATAAAGTGAAAAGAATATTAAAATTAATTAGAAATGTCTGACAAAAATGGATATGTGTAGACGGTAGACCTACATAGCAATCATGCTTTTTTGGGTCAGTCTTGTTTCGTTTCTTTTTGCGGAATCGTGTTGCCTAGCAAAATGTTTGATAAAGAGAGCAAATAGCAAAATGGTAGGAGGCATTGATGTTTTAGCTCCTGATTCTGGCATTAATGGAACAATGAAATCGTTGCCTGAGGATTTCAGTTCCACGGTGTTTATACGAGATCATGTGTCTCTCATAGTTGGAGAGAATGGCATTGGCAATGGAGAGGTTCGGAATGGTACAGAAAATGGGGAAAGAAAGATGGTACTGGGAAGAAATATCCATACCTTGAGCCTTGAAATCACGGAGCCTGATATAGATGACGAGGTTACTGGAGAAAGGGAAGCTTATATGGCAAGTGTGTTGGCCAAATACAAAAAATCTCTGACTGAAAGAACCAATTATCATTTAGGTTACCCCTATAATTTGGATTTTGACTATGGTGCACTCTCTCAACTTCAGCACTTTTCCATCAACAACCTGGGAGATCCGTTTATTGAAAGCAATTATGGTGTCCACTCTAGGCAGTTTGAGGTTGGTGTTTTGGACTGGTTTGCACGGTTGTGGGAATTGGAGAAAGATGAGTACTGGGGCTATATAACAAACTGTGGCACAGAAGGCAATCTCCATGGCATTCTAGTCGGGAGAGAGGTTTTCCCGGATGGGATTTTATATGCCTCACGGGAGTCACATTATTCTGTTTTCAAAGCTGCTCGTATGTACAGAATGGAATGTGTGAAGATTAACACTCTTTGGTCTGGTACAACCGTGAAAGGAGCTGTTGATGATCTTGATCTGGTTATAAAGAAACTTGAAGAAGCTGGATTTTCAAATGACAGGTTCTACATCCATTGTGATGGAGCTTTGTTTGGTCTCATGTTGCCTTTTGTCAAGCGTGCTCCAAAAATTTCTTTCAAGAAGCCAATCGGTAGTGTGAGTGTTTCAGGCCACAAATTTGTGGGGTGCCCCATGCCCTGTGGCGTTCAGATAACAAGATTAGATCATATTAATGCTCTTTCGAGGAACGTAGAATACCTTGCTTCTAGAGATGCCACAATCATGGGAAGCAGAAATGGGCACGCCCCCATATTCCTGTGGTACAGTCTAAACATGAAAGGGTACAGAGGCTTTAAGAAAGAGGTGCAGAAGTGTCTGAGGAATGCACATTATTTCAAGGATCGACTAGTGGATGCTGGAATTGGAGCGATGCTTAATGAGCTGAGTAGTACTGTTGTGTTTGAGAGGCCACATGATGAGGAGTTTGTGCATAAGTGGCAGTTGGCATGCCAAGGGAACATTGCACATGTTGTGGTCATGCCAAATGTGACTATAGAGAAACTTGATGATTTTCTCAATGAGCTTGTGCAGAAGCGTGCTGTGTGGTTCAGAGACGGGAAGTCTCAACCTTATTGTATAGCTTCTGATGTAGGCCACAAAAATTGCCTCTGTGCTCTGCATGCATAGTTGATTGTGGTACCATATCATCAAGAGTTGTGTGTAATTAGGTAGCTATATTTGTACTATGTTTCTTTGGCAGTGTTTTGATGTACCTTTGTCAGATTGTTGCTTTTCTCATAAAGGCAATAGATGGATAAATAATTGCTGAAAGAAAGGTAGCCTCATTGTCATCTGATATTCTGCAAGAAATGTTTATTTCATTTTCTCGA 2602 0.3843 MLFWVSLVSFLFAESCCLAKCLIKRANSKMVGGIDVLAPDSGINGTMKSLPEDFSSTVFIRDHVSLIVGENGIGNGEVRNGTENGERKMVLGRNIHTLSLEITEPDIDDEVTGEREAYMASVLAKYKKSLTERTNYHLGYPYNLDFDYGALSQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKINTLWSGTTVKGAVDDLDLVIKKLEEAGFSNDRFYIHCDGALFGLMLPFVKRAPKISFKKPIGSVSVSGHKFVGCPMPCGVQITRLDHINALSRNVEYLASRDATIMGSRNGHAPIFLWYSLNMKGYRGFKKEVQKCLRNAHYFKDRLVDAGIGAMLNELSSTVVFERPHDEEFVHKWQLACQGNIAHVVVMPNVTIEKLDDFLNELVQKRAVWFRDGKSQPYCIASDVGHKNCLCALHA 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03208 488 Gene3D Aspartate Aminotransferase, domain 1 364 459 IPR015422 GO:0003824
Pste3g03208 488 SUPERFAMILY PLP-dependent transferases 122 457 IPR015424 -
Pste3g03208 488 PANTHER - 255 487 - -
Pste3g03208 488 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 312 333 IPR021115 GO:0016831
Pste3g03208 488 Gene3D - 152 253 IPR015421 GO:0003824
Pste3g03208 488 Gene3D - 254 359 IPR015421 GO:0003824
Pste3g03208 488 Pfam Pyridoxal-dependent decarboxylase conserved domain 255 407 IPR002129 GO:0016830|GO:0019752|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03208 Pste-Chr3 24765399 24768825 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03208 229 400 Calmodulin-binding Proteins AT2G02010 25.683 1.03e-06 49.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03208 3 24765399 24768825 Pste2g01649 2 17254844 17257758 PCT