Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03205 ATGAAATGCACATGGAATTTAGTACAAGAGTTGAAACCTGGCCTGCTGATGGCGCTCACGCAAGTTGCGTATGCTTCTGCGAATGTGCTTTACAAGCTCGCCATTAATGGTGGAATGAGCATTAGTGTAGTCACTGCCTACCGTCACATTTTTGCAGCTCTTTTCTCTCTGCTTCTTGTTCTTCTTTTCGAAAGACAAAACAGGCCAAAGTTGACATGGAGGGTGCTTTTGATGTCATTTTTTTCCGGTCTATTTGGAGGTTGTTTAGCGCAAAACCTTTATTTCATCGGCTTGGCTTCGGTATCAGCAACATTTGCTACCTCCATTTATATTCTCGTACCTGTGATCACTTTTATCTTCTCCGTGTTGTGCGGCTTCGAAAAGTTAAATTTGCAAAACGCAGCTGGGAGGGTCAAGGTGTTGGGAACCACAATAGGAATTAGTGGGTCAATGCTGCTAACATTTGTCAAAGGTGCACAAATTAAAATTTGGACCTTTCATATTAATCTTTTGCATACACATCAAAATGGGCACATAGGAACACCCCATGCCGATTCTGGAAGAAAATGGCTTGGTGTTTTATGTGGTCTTGCAAGTGGCTTCAGTTTTTCATTGTGGCTCGTAATTCAGACTAAGCTTAGTAAAGAATATCGTAGCCATCACTCAAGTACAGCATTGATGACCTTAATGGCCGCAATACAAGCCACAGTGTTTGCCCTGTGTGTTGAGAAGGATTGGAGCCAATGGAAGTTGGGTTGGAGTATTAGGCTTTTAACTGCAGCTTTTTCGGGAATTGTAGTATCTGGATTGGTGGTTCTTGTCACTGCATGGTGTGTAAGGATTACAGGTCCACTGTATGCATCCATTTTCAACCCTCTCTCGCTTGTCATAGTGGCTATTTTTGCTCCCTTAATATTGGATGAAAACCTATACGTAGGAAGTGTAGTTGGAGCAGTGCTAATTGTGTGTGGCTTGTACATGGTGCTGTGGGGTAAAAACAGAGAAATGAGACGGGCCCAGTTGGCATCATCAGACAATGAAAATTTTGAAGCTATTAATATTGGCGCTGTTGTTATTTCGACATTGGATCATGAGAAAATTGATTGCGGCAACAATAGCCGCACCAATAGTAATACTAATATTGTTTAG 1149 0.4195 MKCTWNLVQELKPGLLMALTQVAYASANVLYKLAINGGMSISVVTAYRHIFAALFSLLLVLLFERQNRPKLTWRVLLMSFFSGLFGGCLAQNLYFIGLASVSATFATSIYILVPVITFIFSVLCGFEKLNLQNAAGRVKVLGTTIGISGSMLLTFVKGAQIKIWTFHINLLHTHQNGHIGTPHADSGRKWLGVLCGLASGFSFSLWLVIQTKLSKEYRSHHSSTALMTLMAAIQATVFALCVEKDWSQWKLGWSIRLLTAAFSGIVVSGLVVLVTAWCVRITGPLYASIFNPLSLVIVAIFAPLILDENLYVGSVVGAVLIVCGLYMVLWGKNREMRRAQLASSDNENFEAINIGAVVISTLDHEKIDCGNNSRTNSNTNIV 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03205 382 PANTHER WAT1-RELATED PROTEIN 14 343 IPR030184 GO:0016020|GO:0022857
Pste3g03205 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 143 - -
Pste3g03205 382 Pfam EamA-like transporter family 15 142 IPR000620 GO:0016020
Pste3g03205 382 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020
Pste3g03205 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03205 Pste-Chr3 24745471 24747587 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03205 11 378 Nodulin-like Gene Family AT1G25270 38.315 1.91e-89 272
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03205 3 24745471 24747587 Pste3g03205 3 24745471 24747587 ECH
Pste3g03205 3 24745471 24747587 Pste2g01639 2 17149961 17151679 PCT
Pste2g01642 2 17184243 17188078 Pste3g03205 3 24745471 24747587 PCT