Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03198 CGTGCATGATGCATTGTTCCTCTGCGAAGTGTTTTAAAACATTTATACTTGAAGAAGCTAGGATTGTACTTTGGTTATAGGGAGTGGAATGAATATGGATAATTTATACAGTGTTGAAGCCACAGGTAATGTTAAGCCTGTACTGTTAATGATAGTGCTCCAGACCCTATATGCAGTGGTGAATATCATGTTAAAGATGGTGGCAGATGATGGAATGAGCTTAAGTGTTCTTATTGCCTACCGGTTCATCTTTGCTTCTGTCTTTATTATTCCACTTGCTCTCTTCTTTGAAAGGAAAAGCGTGCAAAGTGTTACTGGGCAAGTTCTACTCTTAGGTTTTCTTTGTGGGTTATTTGGGGGATCCTTACTACAAGGTCTCTATGTTAAATCCTTGGCCTTGACAACTGCAGTATTTGTTACAGCCATGTTGAACCTCGTCCCAGCTGTCACCTACATCATGTCTGTTGTTCTTAGATTTGAGAAGTCAAATCTTGGAACACCAGGTGGGAAGGCCAAGTTGGTGGGAACTTTAACAGGAGTTGGTGGTGCCATGATCCTCACTTTCTACAAAGGAAGAAGCTTATGCCTCTGGTCAACACACATTGACTTGTTGCACCATACACCATCACCACACGGTGCCCCCACTGGCTCTCTCTTGTGGGGCTGCGTGCTAGCTTTTGGAGCAGCTTTAAGCTACTCATTGTGGTTGATAATCCAGACAAAGATGAGCGAAAAGTTTCCATGGCACTATTCAATTGCGGCTTTAACCTCTGCAACGGCCTCCATCCTATCCGTTACATTTGCTCTTTCTACTGAGAGAGATTGGAACCAGTGGAAACTTGATTGGAACATGAGGCTTCTAACAGCAGCTTCAGCGGGTATTTTGGCCTCAGGAGTGTGTTATACCCTTTTAGCATGGTGTGTGCGCAGGAAGGGACCTCTGTTTGCGTCTGCTTTTGGTCCTCTAATGCTGGTGATAGTGTCCCTTTCTGAGCCATTGGTGCTAAATAAGTGTCTCAACATTGGAAGTGTAACAGGATCAGTGTTGATTGTGGGGGGGTTGTACATGTTATTGTGGGGTAAAAGCAAGGAAAAAGAGATGGAGCAAAGTGAGATGGTGTCCTCAAAGGGCTTTGTTCAATGTGAAGCAATCCACGTTACGAACCCATCTTTAGCACGCAGCCAACCAAATAGAGCATGAGAAGAAGATTCTAGCAAGTGTTCTTCCTTATACATCATCAAGTGTCAACCATTCTTGAGCTCAAATTCAACAATCAAATCCACTAGGATTGGTCTAGTGACAAGTTGAGTCATGAGTTTTTGTTCAACAAAAACAAGTCCAACGATCGAACATTGGAGGATACCAATTCATATGATAAGTTTATAGGGTCATAAACATTTTTTTGTTTCTATATTTATTACTTTGTTTTAATGGGATAGTCTTCCACAAACTCACTTTTGAAT 1464 0.4208 MNMDNLYSVEATGNVKPVLLMIVLQTLYAVVNIMLKMVADDGMSLSVLIAYRFIFASVFIIPLALFFERKSVQSVTGQVLLLGFLCGLFGGSLLQGLYVKSLALTTAVFVTAMLNLVPAVTYIMSVVLRFEKSNLGTPGGKAKLVGTLTGVGGAMILTFYKGRSLCLWSTHIDLLHHTPSPHGAPTGSLLWGCVLAFGAALSYSLWLIIQTKMSEKFPWHYSIAALTSATASILSVTFALSTERDWNQWKLDWNMRLLTAASAGILASGVCYTLLAWCVRRKGPLFASAFGPLMLVIVSLSEPLVLNKCLNIGSVTGSVLIVGGLYMLLWGKSKEKEMEQSEMVSSKGFVQCEAIHVTNPSLARSQPNRA 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03198 370 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 162 - -
Pste3g03198 370 Pfam EamA-like transporter family 17 156 IPR000620 GO:0016020
Pste3g03198 370 Pfam EamA-like transporter family 190 329 IPR000620 GO:0016020
Pste3g03198 370 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 335 - -
Pste3g03198 370 PANTHER WAT1-RELATED PROTEIN 16 339 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03198 Pste-Chr3 24663028 24665516 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03198 15 337 Nodulin-like Gene Family AT1G25270 40.308 2.41e-81 251
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03198 3 24663028 24665516 Pste3g03198 3 24663028 24665516 ECH