Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03191 ATGGGATTGGGAGTGTGTGCTTCACAAGGAAGGAACACGTGTCCAGATTCCATAGCAGCCTCATTTTGCATAGCCCGAATGACCCCTTTGTTTTTCAACCCTCAGTGGTTTCTAGTTGCTGTGGGAAATGTTCAGGAATATGTCTCACTTCACTCCCTTTTTGTTGGAATATCCATTCATAATTTAGACGGAAGAGAGACTGACACTTCTGGAAATTCGGTATGGCTTTTGGTAATTCAAGATGTGCAAGGTTCGTTTGAAGATGATCTGGAGCTAGCAAAATTTCCGGCAAGTAACGGTGACAGCGGTGTTAAGATTAAATACCACATTGATGGGACACAAATACCTGAGCCTAGTTCAGAAAAGACTCAGAAAAAGGTGACGGGGAAGTTCTTGAAAGGTAGAATGTTGTCAAGAGTGTTCTCAGAAGACTATGACAGAGTGAAAAGAAGAGTGTTAGATCCTAGGGGAAAGACCATTCACCGATGGAACAAGATTTTCTTGGTAGCATGTTTAGTGTCTTTGTTTGTGGACCCTCTGTTCTTTTATTTGCCAGTGGTTCGAGATGGAATGTGCATCGACATAGGAATAACTCTTGAAGCTATCCTTACATTGGTAAGATCAGCGGGTGACGCCTTTTACGTGATTCAGATTTTGATCAAGTTTCGTACGGCTTTTATTGCTCCTTCTTCAAGGGTTTTTGGGAGAGGAGAACTTGTTGTAGGATATTCTAAGATTGCATTTAGGTACCTCCGCAAGGGTTTCTGGTTAGACTTTGTTGCTGCTCTGCCCCTTCCTCAGGTGTTAATTTGGGTTGTTATCCCAACTCTTAGGGGTTCAACCATGGCCAACACAAAAAATGTCCTTCGCTTTTTCATCATTTTCCAATATTTTCCGAGGCTACTTTTGATTTTTCCACTCTCATCCCAAATTGTAAAAGCTACAGGGGTTGTGACACAAACAGCATGGGCAGGAGCAGCATACAACCTGATGCTTTACATGTTGGCTAGCCATATAGTACAAGCTAATTTAATTTTGTTTTCGAATGGGAAATATTCAAAAAAGATTTTAGGGGCTTGCTGGTATCTTCTATCAATAGAGCGTCAAGAAGCATGCTGGAGAAGTGTATGCGATTTGGAGAAGTCATCTTGTGAATATGGATTCTTTGACTGTCATAGGGTTAAAGATGCCCTGAGGGTGTCCTGGTTTATGGGAAGCAATATCACGAGTTTATGCTCTCCAAATGCGAAAGATGAGTTGTATCAGTTTGGTATATACGCTGATGCAGTGACGTCCAAAGTTACATCCTCAGCGTTCTTTAATAAGTACTTCTTTTGCCTGTGGTGGGGCCTAAGGAATTTGAGTTCTTTGGGACAAGGGCTTCTTACGAGTACATATGTTGGAGAAGTAATGGTGGCGATTGTTGTGGCAGCCCTTGGATTGATTCTGTTTGCGTTGCTAATTGGTAATATGCAGACATATCTCCAATCAACGACAGTAGGGTTAGAAGAGTGGAGGGTGAAAAGAAGTGATACAGAACAATGGATGCATCACAGGCAACTACCTAGAGAACTAAGAGAATGTGTGCGTAAATATGAGCAATACAAGTGGGTGGCTACACGAGGAGTAGACGAAGAAGGTGTGTTGAAAGGACTTCCGATGGATCTAAGGAGAGACATAAAGCGGCACTTGTGTCTGGATCTAGTTAGAGGAGTGCCGTTGTTTAATGAAATGGATGAGAGAATGCTGGACGCAATATGTGAAAGGCTAAAGCCAGCATTATGGACGGAGGGGACATATGTGGTGAGGGAAGATGATCCGGTGAATGAGATGGTATTCATAATGAGGGGCCATCTTGATTCATACACCACAAACGGAGGGCGCCAGGGATTCTTCAACTCATGCCGGATTGGGCCAGGCGATTTCTGTGGAGAGGAGCTTCTAACTTGGGCCCTCGACCCATGCCCATGCCCATGCCCATGCCCATGCCCATGCCCCACTTTCATTCTCCCCTCCTCCTCTCGAACTGTCAAGGCCGTCTCAGAAGTCGAGGCCTTTACACTCATTGCCCAAGACCTCAAATTTGTCGCTTCACAGTTCAGAACTCTCCACACCAAACACCTCAGACATAAGTTCAGGTTTTACTCTCACCACTCCAGAACCTGGGCTGCCTGTTTCATCCAAGCCGCCTGGAGAAGCCATAAGAAAAGGCAACAAGCTCAACTCACTATAACACACTCTCCACTTGTACCCTCTTTGCACAAGCCACCTCATCCTCACTTCTCTCTTCATCAATCATATATTCATTAATATTAACTACTCCATCCATGTACATATCTATATATATACACTCTCTTCCCCCTTTCTCTTTTCTTCTTCTTCTTCTTCATATCAATTACAGATACCCATC 2410 0.4369 MGLGVCASQGRNTCPDSIAASFCIARMTPLFFNPQWFLVAVGNVQEYVSLHSLFVGISIHNLDGRETDTSGNSVWLLVIQDVQGSFEDDLELAKFPASNGDSGVKIKYHIDGTQIPEPSSEKTQKKVTGKFLKGRMLSRVFSEDYDRVKRRVLDPRGKTIHRWNKIFLVACLVSLFVDPLFFYLPVVRDGMCIDIGITLEAILTLVRSAGDAFYVIQILIKFRTAFIAPSSRVFGRGELVVGYSKIAFRYLRKGFWLDFVAALPLPQVLIWVVIPTLRGSTMANTKNVLRFFIIFQYFPRLLLIFPLSSQIVKATGVVTQTAWAGAAYNLMLYMLASHIVQANLILFSNGKYSKKILGACWYLLSIERQEACWRSVCDLEKSSCEYGFFDCHRVKDALRVSWFMGSNITSLCSPNAKDELYQFGIYADAVTSKVTSSAFFNKYFFCLWWGLRNLSSLGQGLLTSTYVGEVMVAIVVAALGLILFALLIGNMQTYLQSTTVGLEEWRVKRSDTEQWMHHRQLPRELRECVRKYEQYKWVATRGVDEEGVLKGLPMDLRRDIKRHLCLDLVRGVPLFNEMDERMLDAICERLKPALWTEGTYVVREDDPVNEMVFIMRGHLDSYTTNGGRQGFFNSCRIGPGDFCGEELLTWALDPCPCPCPCPCPCPTFILPSSSRTVKAVSEVEAFTLIAQDLKFVASQFRTLHTKHLRHKFRFYSHHSRTWAACFIQAAWRSHKKRQQAQLTITHSPLVPSLHKPPHPHFSLHQSYIH 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03191 769 Gene3D Jelly Rolls 572 702 IPR014710 -
Pste3g03191 769 SUPERFAMILY cAMP-binding domain-like 504 711 IPR018490 -
Pste3g03191 769 ProSiteProfiles cAMP/cGMP binding motif profile. 574 648 IPR000595 -
Pste3g03191 769 Gene3D Helix hairpin bin 503 565 - -
Pste3g03191 769 CDD CAP_ED 574 715 IPR000595 -
Pste3g03191 769 MobiDBLite consensus disorder prediction 749 769 - -
Pste3g03191 769 Pfam Ion transport protein 163 499 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pste3g03191 769 SUPERFAMILY Voltage-gated potassium channels 154 496 - -
Pste3g03191 769 FunFam Cyclic nucleotide-gated ion channel 1 572 700 - -
Pste3g03191 769 SMART cnmp_10 574 715 IPR000595 -
Pste3g03191 769 Gene3D - 165 498 - -
Pste3g03191 769 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 137 743 - -
Pste3g03191 769 FunFam Cyclic nucleotide-gated ion channel 1 501 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03191 Pste-Chr3 24615646 24619570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03191 129 738 Ion Channels AT2G28260 72.459 0.0 932
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03191 3 24615646 24619570 Pste3g03191 3 24615646 24619570 ECH
Pste3g03191 3 24615646 24619570 Pste1g02655 1 10358185 10362562 PCT