Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03175 AAAAGAATTGGAGGAAGCAAAAAATCTGTGAAGCAAGTGCAAGACTCGGTTGCATCTAAAGCTCCAACAGACAGAGAGTTTGAAACTCGGAAAATAAAGAGAAAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAGACGGAGGCATATGAAAAAAGGAGGGAGGTGAAGGTAGCAGATAGAAGGGAGAGGGGCCCCAACCATTGAGTGAGGAGAGCGGCAGAGTTTTGCAATGCTTGCGTAGTAAAATTTAACTTTTAACAGCGACTTTACGTGAATTTAAACGTCAAAGCTAAAGGGTCATGATGATAATGATTGTGGTGCTGGCTAGGCGTGAAAGCTTTGTTGAATTGATTCTAATCTGAATATTGTAACTGGTTTGGTCTGGTCTCCATCATCGCCATGACACAGGTGAAAGTACCTTAACTCCTTAGTCCTTTCTCCTTTCTCACCCTTCTACTGTGTCCACACCAATAATAAAGAGCTTCCTGTTTTCTTTCTTTTCTTGGCTCCTCCTCTCCAAACACAAGATTTTTATGTGTAGGTTTCTCCCCGCTTCATGTCTCTGCGTCGTTTTCCCTCTACGCACAGCCTAGTCCGTGTTTCTTACCTCCTTCTTCTTGTTTCTGCATATTTAATAATGCTCTCAAGCTGCCTCCGCTGTAGCTCAGTTCCATTTTATCTTGTTTTAAATACGACGAGGCTTCTCTGGATGTGTGAGGGCATAGATCCATTTCAAGGGAGCCCTACAGCTAGGGTTTCACTACCTCTTTTTGTCTACCTCTAAGACCTTCTGCTTTACGTATATCTTTTAGGTTGTTTTTCTTTTTCGGCTGCTAATTCTGTGCTTCTCCTTCTCTATTTTTTTTTTGTCACCGACACAGATACTTCGCTGTTTAGTGGATGGAAAAGCCATCACATTGGACCTGTTTTTTGCGATCACTTTTTATTCATATACTTTTGGTGTTTGGTGAGGAAGAGTTACCTCTCCAGCTTTTTTTTTTTTAACACCTACGAGCTAAAGATAGTTTGAGAATTCACAAAAGGAAATTAGAACAACCCGCTTTCGAAACACATGTACAAGGAGAGCAATTATGGACTGGGTTAATTCCAGTGGGTGTTCTCCAAGTTCTGAAAGTTTTTTTTCACTGAACGTTGAGAAGTTAATGTAAGAGGTTGTCATTGTGCCGTTGGAAATTGTGTGTTGGAATGAGCAGTTTAAGGCCTGAATCTCACATAGCACAGCAAATTCGGCGTGAAAAATTGAGAATCCAGAACAGTTCTCAGCCTTTACACGAATTCCCTAACAATCTTGAATAGTTATCTTTACACCCGGACTTGGTCCTTCTTCAAGTTAGAAATGTTAGAAACGCTAAGATGCTAGATGAACCAGTTGTTTATTCGTCAGAAATGCCAAACTTCTCCACTGCTACGAACCCTTTGTCTGCTCCAAGGAACGCGTCGGAGTATCACCAAGAATTAGGTGCAGCAGCTGAACCGAGTAATCCGCTGATGATGAATCAGTATGGTTCATATCCCTATTCAATGCCTGCAATTCATTCTTCCCATAAAGAACAGTGTGATCTTCGTAATTTGGGAAATTGGAGGAACAGTGCCACACATCATGGATCTGATTGGTTTGTAAATTATGCAAGCAATTGCAATTCTTTTTTGCCTGCTGAGCTGAATAACCTGTCTGCTTACAATGAACTTATGGATGTACAGTGTAGCAATGCATCTGGGGAGATCAGTGGTAGAGAAATTCAAAAGCAATTGGGTGCACTGCATAATCCTCCACTTTATCAAAATGCTTTGCAAGATATTGTAAAGTCAGCATCTATCTGTGCCCACACCAGGCAAGATATGGCTTCACTGATGCAACAAAATGACCACAGCATTTGGGTGGGGAGTATTAGTGACGTTGAACATAAACAACTAAGTTATGAAAATCAGCCAAATGGCCAAAATCCATTGCGATTTGGATGGACAAATCGAACAATTTCTAATTCTCTGCGCGATTCACTTCCTCAGAGCTTGTCCTTGTCACTTTCATCAAATGCACAAGCTAAGCCTTCCCTTTCTCAGCTTGAACAAGGGTCTACATCAGATGATCCTCAGTCTTTGAAGTATATGAAATCTATTGTGAAGCCTTCTATCATTTCTAGAGATTGCGGGAAGTCACTTCATGAGACGGTGGGGATGCCTTCAAAGAGTACTATTAATTATCGAAGTGTGGGTCCCCTTGGCCCTTTCACTGGATATGCTACTATTCTTAAAAGTTCGAGGTTCTTAAAATCTGCTCAACAATTGTTAGATGAGATTTGCGGTCTATCTGGTGCAAAATTTGCGAAATCATATAATGTTTCTCCTGAAGTTAGTGTTTCTACTTCTGCCAATGAAACTGGGGTTACTGCAAAATATAGTAACTCAGGTTCATCATCTATGCTATATAATGTTTCAAAGGAAAATAGGGCTGATCCTGGAGTTGGGAGTAGCTTTGGTCCTTCCTCGCGACCAGATTATCAACATAAGAAAGCAAAGCTCCTGTACATGCAAGAGGAGGTTAGCAGGCAATGCAAGCAGTACCATCTGCAAATGCAAATGGTTGTTTCATCGTTCGAGTCGGTAGCGGGTCTTAGTTCTGCTACTCCTTACATCCCCATGGCTCTCAAGTCAGTAGCAAAGCACTTCAGGTGCGTAAAAAATTCTATCTCCGATCAGATCAAACATATAAGTGAAGGCTTGGGAGAGGATTTGTCAATACCCTCCAGCAGTACCTGTAGTAAAGCTGACGCTACTTTGGCAAGGGTAAGATGCAGCATGGACCAAAGCTTTCTAAAGAACAAATCTGGTAGGGGTACCACGGAACTTCTTCAACCCCAACAGCATGTGTGGAGGCCCCAGAGAGGTTTGCCAGAGCGTGCTGTGGCAATTCTTAAAGCCTGGTTATTTGAGCATTTTCTTCATCCTTACCCTACAGACACTGATAAACACATGCTGGCTAGTCAAACAGGTCTTTCACGAAACCAGGTATCAAATTGGTTCATAAATGCTCGAGTACGAGTGTGGAAGCCAATGGTTGAGGAAATACACACGCTTGAAACAAAAGCAACAGGGTCGAAGGACAATTGTGGTAAAAATGAGGGAACATCTTCTGGCACTGGCACTGGAGGTGATAGCAGCCACCAGCATAGAGTAGATAAGCCTTTAAGCAATATTGGTACGAATTCAATACCTGAAACCCAATTTGAGAGTATGGATATGGGATCATCCATGGCTGCCAATGCGGAGGAAAGTGGGTTAAATGCAGAACAATGGAATCGAGAGAAACGTTCGAAATTGGAATGCCAAATGCCTTCAAACATGGATGGTACACTGATGGGTTTTGTGCCATACCGACGTGGTGGCATTGAGGTTGGTGGACTAGGGTCTGTGTCACTAACATTGGGTCTTAGGCATGGCGTTGAAGGGGCACAACACCAACAACAATTGCAAGAGGAACAGCTTAGGCATCACCTTGGAGGCCACATGATCCACCACTTTGTGGGCTGATTATAGTTACTTTGTGATGGGTGTAAATCGAAAAAATGGTAAATGAAACGTTGAAACTTAATTTTGGAGATATGCTGGTCAAAAGGGTCGTCATAATGAAAAGGATTGGGTGTGAGGTGGAGTTATTTTTGGATTTTGCGTACATTTCTCTATCATTAGTTCTTTATTAACTTGGGAGAGATCACGAGCATGGTAAAACAAGGTTGAGCTTGTAAAGATTCAGAAAATGTATTTTATATTAATTATGACGGAATATTTCCTCCTCTCAAAACAAAGTGGTGAATAAATAATGTAGTGAAGCATTGATCACGATCTCTGTATTAAGAGGATTTTGTTAATGTTAATTAAAGCAGTGGC 3912 0.4139 MLDEPVVYSSEMPNFSTATNPLSAPRNASEYHQELGAAAEPSNPLMMNQYGSYPYSMPAIHSSHKEQCDLRNLGNWRNSATHHGSDWFVNYASNCNSFLPAELNNLSAYNELMDVQCSNASGEISGREIQKQLGALHNPPLYQNALQDIVKSASICAHTRQDMASLMQQNDHSIWVGSISDVEHKQLSYENQPNGQNPLRFGWTNRTISNSLRDSLPQSLSLSLSSNAQAKPSLSQLEQGSTSDDPQSLKYMKSIVKPSIISRDCGKSLHETVGMPSKSTINYRSVGPLGPFTGYATILKSSRFLKSAQQLLDEICGLSGAKFAKSYNVSPEVSVSTSANETGVTAKYSNSGSSSMLYNVSKENRADPGVGSSFGPSSRPDYQHKKAKLLYMQEEVSRQCKQYHLQMQMVVSSFESVAGLSSATPYIPMALKSVAKHFRCVKNSISDQIKHISEGLGEDLSIPSSSTCSKADATLARVRCSMDQSFLKNKSGRGTTELLQPQQHVWRPQRGLPERAVAILKAWLFEHFLHPYPTDTDKHMLASQTGLSRNQVSNWFINARVRVWKPMVEEIHTLETKATGSKDNCGKNEGTSSGTGTGGDSSHQHRVDKPLSNIGTNSIPETQFESMDMGSSMAANAEESGLNAEQWNREKRSKLECQMPSNMDGTLMGFVPYRRGGIEVGGLGSVSLTLGLRHGVEGAQHQQQLQEEQLRHHLGGHMIHHFVG 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03175 724 MobiDBLite consensus disorder prediction 608 622 - -
Pste3g03175 724 MobiDBLite consensus disorder prediction 578 601 - -
Pste3g03175 724 Pfam Associated with HOX 298 446 IPR006563 -
Pste3g03175 724 CDD homeodomain 506 567 IPR001356 GO:0003677
Pste3g03175 724 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 172 593 - -
Pste3g03175 724 SMART prehox3 293 447 IPR006563 -
Pste3g03175 724 SMART HOX_1 506 570 IPR001356 GO:0003677
Pste3g03175 724 FunFam BEL1-like homeodomain protein 9 509 571 - -
Pste3g03175 724 ProSiteProfiles 'Homeobox' domain profile. 503 566 IPR001356 GO:0003677
Pste3g03175 724 SUPERFAMILY Homeodomain-like 508 572 IPR009057 -
Pste3g03175 724 Pfam Homeobox KN domain 523 562 IPR008422 GO:0003677|GO:0006355
Pste3g03175 724 Gene3D - 509 571 - -
Pste3g03175 724 MobiDBLite consensus disorder prediction 1 25 - -
Pste3g03175 724 MobiDBLite consensus disorder prediction 10 25 - -
Pste3g03175 724 MobiDBLite consensus disorder prediction 578 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03175 Pste-Chr3 24516384 24523348 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03175 265 575 Homeobox Transcription Factor Family AT4G34610 40.549 1.18e-61 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Pste3g03175 POX 1.6e-38 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03175 3 24516384 24523348 Pste3g03175 3 24516384 24523348 ECH
Pste3g03175 3 24516384 24523348 Pste1g02682 1 10585676 10592593 PCT