Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03173 ATGTGCAAGACGAAGATGGCAACCAACGCGGCCAGTCCCACTCGCACCCCTCGTGGCAAGCAAAGCCCACGAACATCGTCGACGAGGCCCACTTCCAGGTCCAGTCCGGGGCCCACCACTTCTTTATCAAACAAACCCTCCACTTCCTACAGCACAACAAGCAGCGCTAGCGCACCCTACAGCGGCTCCACCGGATACCGCCTCTCCTCCGACACCTCCGTCGCCAGTCTCGCTTCCCTCGCCTCCCTCCGGGATTCTCTCCCCGAAAACCCTCACATCTACGACTTCTCTGAAATCTGCGCCGCCACCAACAACTTCCTCGCCAAGCGCCACTCCTCCTCCACCCCGTCCTGGCGCTGCACCCTCCGCGGAGCCGACGTCATTGTCTTCCAGCGCAAGTTCCGTCGCAAACTCCAAACCAATCAGCTCCAGCAACTCCTCTCCGTCGTCTGCCGCAGCCACCACGTCAGCATCATCAAACTCCTCGGGTCCTCCGTCTCTGGCGATCACATCTACCTCGTCTACGACTTTATCAACGGCGCCAGCCTCTCGGATTGCCTCCGCAACAAGAACAACGCTCACTTCACCGTCCTCTCCACGTGGATGTCGCGAATGCAGGTCGCCACCGATCTCGCTCACGGCCTCGATTACATTCACAACAAAACCGGTCTCAACATCAATTTAGTACACAATCATATCAAGAGCAGCGGAATCATCGTCACCGAACCTTCCTTCAACGCTAGGGTTTGCCATTTCGGCGCCGCGCAGCTCTGCGGTGAAATCGAACTCGAAAACGACGAATTAGGGGAAATCACTGAATTCTCCGAGAAATTCCCGCCGTCGCCTGCGAGATCCAAACAATTCGAGGGCGTACGGGGGTACATGTCACCGGAGTTTCAAGCCTCTGGCGTGGCGACTCAGAAATCTGATATATACGCTTTTGGAGTGTTGATGTTGGAGCTGTTGTCCGGAGAAGAGCCGTTGAAGTTTAGGTTCGAGGAGAAGACGCGCAAATTTGTGAAGACATCGGTGATCGAGGCGGCGAGGGCCGCCGTGGACGGCGACGAGGGTAGCGTGGAAGGGAAGCTGAGGAAGTGGGTTGATCGGAGATTGAAAGATTCTTTTCCCATCGACGTTGCGGTGAAATTGACACGTGTCGCACTAGAGTGCGTACACGTGGATCCAGATAAGAGACCCAACATGGGACGCGTCGCTGGCAAGATCTCTAAGTTTTATTTGACGTCGAGAATCTGGTCAGATAGTATTAAGATGCCTGATTTTACTGTTTCCTTGGGTCCTCGGTGA 1305 0.5548 MCKTKMATNAASPTRTPRGKQSPRTSSTRPTSRSSPGPTTSLSNKPSTSYSTTSSASAPYSGSTGYRLSSDTSVASLASLASLRDSLPENPHIYDFSEICAATNNFLAKRHSSSTPSWRCTLRGADVIVFQRKFRRKLQTNQLQQLLSVVCRSHHVSIIKLLGSSVSGDHIYLVYDFINGASLSDCLRNKNNAHFTVLSTWMSRMQVATDLAHGLDYIHNKTGLNINLVHNHIKSSGIIVTEPSFNARVCHFGAAQLCGEIELENDELGEITEFSEKFPPSPARSKQFEGVRGYMSPEFQASGVATQKSDIYAFGVLMLELLSGEEPLKFRFEEKTRKFVKTSVIEAARAAVDGDEGSVEGKLRKWVDRRLKDSFPIDVAVKLTRVALECVHVDPDKRPNMGRVAGKISKFYLTSRIWSDSIKMPDFTVSLGPR 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03173 434 SUPERFAMILY Protein kinase-like (PK-like) 130 404 IPR011009 -
Pste3g03173 434 MobiDBLite consensus disorder prediction 1 63 - -
Pste3g03173 434 PANTHER OS09G0572100 PROTEIN 1 434 - -
Pste3g03173 434 Gene3D Phosphorylase Kinase; domain 1 70 177 - -
Pste3g03173 434 Gene3D Transferase(Phosphotransferase) domain 1 179 420 - -
Pste3g03173 434 Pfam Protein kinase domain 135 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03173 434 ProSiteProfiles Protein kinase domain profile. 66 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03173 Pste-Chr3 24483404 24484708 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03173 89 422 Receptor kinase-like Gene Family AT1G51940 30.973 6.15e-41 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pste3g03173 Pkinase 3.2e-22 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03173 3 24483404 24484708 Pste3g03173 3 24483404 24484708 ECH