Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03170 CTTGTCCTAATTGATGGGTAGAGGCCGAGAAAAACCCACAAAGATGGACATTGATCTCTCTTTGAAGATAGATACTACTGATGATGAGCCAAAAGAAGAAATAGAGGAGCGAGTGAAAGATGATGAAGAGAAAGAAATGGCACAGATTCCGGATAATAATAAGGAAGAAGTCCCAGAAGCCACCGCTGGTGAAATAGAAGATGATACATCAGTTATCGAAACATCTTTGCAAGATAACACAAAAACTAAAGAGTTAAGTGTCTTACAAATGGAGATGGAGAGCATGAAAGAAGAAAACAAAGTGCTGAGGAAAGTGGTAGAACAAACAATGAAAGACTATTATGATCTGCAAATGAAATTCTCAGCAATCCAGGAAAACAATAAAAGAAAGGATCATGAAATTTCTCTCTCACTTCAAGACATTGCGAGCACCAGCGGCGAAGGACCATCCAGAATTCTTGAGATCTTTAACAAAAAAATTCAAAGTGCCCCATCTCCTCCAAACACTGATGATGATAGTTTAAGTGAGAGTGAATTGGGTTTATCACTGAGGTTACAACCAAGCACAAGTAAAAAAGAAAGTGATGTGGGAAATAAGGAAGACAAAAACGATCAACAATTGGCAAATTTTGCATCAGTTCAGAACAAACTGCAGCGGACACATGAGTTGCCCGGAATTACTACCCATGCTGCCTCTCCTCCTAATAGAAAGGCTAGGGTTTCGGTTAGAGCAAGATGTGAGGCTGCCACGATGAATGATGGATGCCAATGGAGAAAATATGGACAGAAAATTGCAAAAGGAAATCCATGTCCACGAGCCTATTATCGTTGCACTGTAGCACCAGGCTGCCCCGTTAGGAAACAGGTTCAAAGATGTATTGATGACATGTCCATACTTATTACAACCTATGAAGGGACACATAACCATCCACTCCCTGTGGGTGCAACTGCTATGGCTTCTACAGCTTCAGCAGCCGCAGCTTCTTTCATGTTGGTAGATTCAAGCAACCCCATTTCAGATGGCACCTCTAGTTTCACCCAAGCACCTCTTCCTTACAATACCTTCCACCCACTAAACCCAGTTTCAAATTTTAGGACCATAAGCCCCAATGATCCATCCAAAGGGATTGTTCTTGATCTCACCAACAACCTCAGTGAACCACTACGTTTTTCTACAGGTAGCTCCTCCAACACTACAACTGATCCTCATTTTTCTTGGATGCCAAACAAATACCAAGGTGGTGCAATTGCAATGAACAACAATTTTCACAAGCCTAGATCTTTGGATATTCATGATAGAGTTTGGAAAGGAGAAGAAAGCAATAAGCCACTAGATGATAATGTGTCCGCAATTGCCTCAGATCCTAAGTTTAGGGTTGCTGTTGCTGCGGCCATAACATCTCTCATGAATAAAGAGAGCCACACTACTCATCCTATAGGGACTTCCTTTGGTCCTAGGAGCGGCCAAAATGGTAGCTAGCTTTAGCTCTAGCTAGTAACAGCAACTGGCTCATAGAAATCTCTCTCGATAAATGGTAATTCCCACTTGATTTTTCACCTTCTTCATAAAAAATTAGTGAATGTTATACCACAGTGTTATATACACTTATCAGGCATTATTACATCATATGTATCTTCATATAAATAATCTTACAGCTGGGTGGTTTCTGCTTTCCTTGTAATTTCTTTTTTGTCTGTCATTGTTGTTGATTGCGCTGGAGTAAGGTTGAGTGATTAATTAGTTGGATGGCATACACGGGAAGGATTTT 1769 0.4064 MGRGREKPTKMDIDLSLKIDTTDDEPKEEIEERVKDDEEKEMAQIPDNNKEEVPEATAGEIEDDTSVIETSLQDNTKTKELSVLQMEMESMKEENKVLRKVVEQTMKDYYDLQMKFSAIQENNKRKDHEISLSLQDIASTSGEGPSRILEIFNKKIQSAPSPPNTDDDSLSESELGLSLRLQPSTSKKESDVGNKEDKNDQQLANFASVQNKLQRTHELPGITTHAASPPNRKARVSVRARCEAATMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCIDDMSILITTYEGTHNHPLPVGATAMASTASAAAASFMLVDSSNPISDGTSSFTQAPLPYNTFHPLNPVSNFRTISPNDPSKGIVLDLTNNLSEPLRFSTGSSSNTTTDPHFSWMPNKYQGGAIAMNNNFHKPRSLDIHDRVWKGEESNKPLDDNVSAIASDPKFRVAVAAAITSLMNKESHTTHPIGTSFGPRSGQNGS 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03170 488 Pfam WRKY DNA -binding domain 248 306 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste3g03170 488 Gene3D WRKY domain 232 309 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste3g03170 488 MobiDBLite consensus disorder prediction 33 56 - -
Pste3g03170 488 ProSiteProfiles WRKY domain profile. 242 308 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste3g03170 488 MobiDBLite consensus disorder prediction 157 188 - -
Pste3g03170 488 MobiDBLite consensus disorder prediction 1 24 - -
Pste3g03170 488 MobiDBLite consensus disorder prediction 1 58 - -
Pste3g03170 488 MobiDBLite consensus disorder prediction 157 201 - -
Pste3g03170 488 SUPERFAMILY WRKY DNA-binding domain 240 308 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste3g03170 488 FunFam probable WRKY transcription factor 31 232 309 - -
Pste3g03170 488 SMART WRKY_cls 247 307 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste3g03170 488 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 50 468 IPR044810 GO:0003700
Pste3g03170 488 MobiDBLite consensus disorder prediction 468 488 - -
Pste3g03170 488 Coils Coil 81 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03170 Pste-Chr3 24451960 24455169 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03170 11 371 WRKY Transcription Factor Family AT1G68150 45.799 3.16e-82 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste3g03170 WRKY 1.6e-24 CL0274