LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste3g03155	ATGTGCAACATCCTTGGCCCAATTATGGACAACTATCAAGGTGATTTGAGTGATATAATTCGCGCCAGTGGTGCATCATATGGCACTTGCAGCACGGGAACTTCATCATCTGAAGCTTGTGCTTCCTTCTCTCGTGATCACTGGCAGTTCTCTTCTGATCCCGTGATTTTCTCTTCTGTTATGGAAGGGTTCAATAGCAACTTCGGTGATCCATTCTCAAACACAAGAGATCCCTTTCTACATGAGCTTGGTTTGCCTTGCTCTGCCTACTTTAATAACAGTACCACAAGTTCTGCAGAAATTAGCAGTTCTGGAGCATTGGAAGAAGCAACTTGTTTTGGTGGTGGGGTTGCTGGTAGCAGTACCAGTAATAGTTGTGTTTTGGCACCAAAGATTCTTGAGGTTGATATGAGACGGCCTTGTAACAGCATATTGTCAAACATGATTCAGATCTCTCCCAATGATAAGTTACCCATCTCGCCAGTGGTGGATGCTTTGTCAAGGGTACTCAAGCCTTGTGGAGGGGTTTCAGGTAACAACATGATTGATATAAAGACCTCTGAAGATCATTGCTTGGTGGGCAACACAGAAGTACAAATCTCATCTCCAAGTCTTACGAGAAGGAAGAGCCAGGCAAAGAAGTCGATTTGTGTTCCTGCACCAGCTGCACCAAACAGCAGACAAAGTGGCGAGGTAGTTCCTTCTGATCTGTGGGCTTGGAGAAAATATGGTCAAAAACCCATTAAAGGTTCCCCATATCCAAGGGGTTACTATAGATGCAGCATCTCAAAGGGATGCCCTGCGAGGAAACAAGTTGAGAGGAGCAGAACAGACCCAAACATGTTGGTCATTACCTACACGTCAGAGCACAACCATCCATGGCCAACACACAGAAATGCTCTTGCTGGTTCATCACGATCCCAACCATCCAAAAACAACAACATTGATGCTTCAAAGAATTCAGAAAATAGTCCCCAAAATGAACAAGTGGGAGAGGAAGAGAGCAACAGTGACAGCAGTAATGTAAATAAGAGTGCAACTTTGAAGGAAGAGAAGCAACTTGAGATAGATGATGGAGAATTCAGTGATATTGGTGGAATCCCTTACAAGTCAATGTCTAAGATGAAGAACTACCAACAACTTGATCAGGATTTGTTTGCTGAATTGGGAGAAAGAGAATGGGCACACTCACTAAACCTCTTGTCTCCACCACAGGATTTTGATGATCAGCAAATGGAATCCAACGCTTTAGATTCATTTCATTTCTTTGACTGGAGCGATGACAGAAGCACTAAGTACCACCTTGTTTAAAGAATCTAATTAGAGAAGGTCGTATATATAATATATAAGACCTTGAAAGGGAAGATGCACCACCTTGATCTCTCACCAAAATCTTTTAATATGTGCAGATCATCATCATCGGATTTCAAATATCTCATGTGGGGGAGATTTGAGATCATAAAACCACTTTTCTTGTGTCTGGTTTTTCCTTTTCTTTTTCTTTCTTGCTTGTCATTTCGTGTAACAGTGAGGGAGGTAAATTTGTGGAAGGAAAATGGGATTCTATATGAGGAAGTGCTGCTTGATTGGAAGCACACACAACGAGTCCCACCTCCCG	1618	0.4258	MCNILGPIMDNYQGDLSDIIRASGASYGTCSTGTSSSEACASFSRDHWQFSSDPVIFSSVMEGFNSNFGDPFSNTRDPFLHELGLPCSAYFNNSTTSSAEISSSGALEEATCFGGGVAGSSTSNSCVLAPKILEVDMRRPCNSILSNMIQISPNDKLPISPVVDALSRVLKPCGGVSGNNMIDIKTSEDHCLVGNTEVQISSPSLTRRKSQAKKSICVPAPAAPNSRQSGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSISKGCPARKQVERSRTDPNMLVITYTSEHNHPWPTHRNALAGSSRSQPSKNNNIDASKNSENSPQNEQVGEEESNSDSSNVNKSATLKEEKQLEIDDGEFSDIGGIPYKSMSKMKNYQQLDQDLFAELGEREWAHSLNLLSPPQDFDDQQMESNALDSFHFFDWSDDRSTKYHLV	436

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste3g03155	436	PANTHER	WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED	191	395	IPR044810	GO:0003700
	Pste3g03155	436	MobiDBLite	consensus disorder prediction	287	347	-	-
	Pste3g03155	436	MobiDBLite	consensus disorder prediction	287	363	-	-
	Pste3g03155	436	FunFam	probable WRKY transcription factor 14	208	288	-	-
	Pste3g03155	436	Gene3D	WRKY domain	223	296	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Pste3g03155	436	SMART	WRKY_cls	234	294	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Pste3g03155	436	Pfam	WRKY DNA -binding domain	236	293	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Pste3g03155	436	ProSiteProfiles	WRKY domain profile.	229	295	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Pste3g03155	436	SUPERFAMILY	WRKY DNA-binding domain	232	295	IPR036576	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste3g03155	Pste-Chr3	24343530	24347105	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste3g03155	1	428	WRKY Transcription Factor Family	AT1G30650	41.138	2.42e-71	229

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Pste3g03155		WRKY	2.3e-25	CL0274