Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03150 GGAGAATGAAATAATTTAGAAGTAAAATAGGTTTATGAAAGTGAGAGGTGTAATGGTGAGGATGAATTGTGATTGATGAGCGAGTGGATCATAATAGGTAATAGGTGTGGTGGTGATGGAAGTAGTTGAGAAAAGTATGATTATTGGGTAAAGGTGTTGTTGAATATGAAATGGGATAGGAAAGAAAGGTTGAGTTGGAAATGCAGAGATCAGGTTATGGGGAGGACGGAATATACAGGTCTCTTAGGCCATCCATAAGGTTACCAAAAGACCCAAACCTCTCCCTCGTTTCCCACCTCTTCAATAGGGTCGCTCACTTTCCCAACAAACCCGCCCTCATCGATGCCAACTCTTCCGAAACCCTTACATTCTCCCAATTAAGGTCTTTAACCGTTCATATCTCCCACGCCCTCCTCCGTCTCGGCCTCTCCAAAAACGACGTCGTCCTCTTCCTCGCCCCCAACGACATTCGCTACCTCGTCTGCTTCCTCGCCGTCACCTCCCTCGGCGCTGCCGTCACCACCGTCAACCCCTCCTACACCGCCTCCGAAGTCGCCAAACAGGCCTCCGACTCCAACCCCAAACTCCTCCTCACCGTCCCCCAACTATGGGACAAACTCCAACACCTCAACCTCCCCGCTGTCTTCCTCCGCTCCCGCTCCCACTCCCACTCCCACTCCCACTCCCACTCCAACGTCACCACCTTCGACGCCCTCCTCCAACTCGGCGCCGACGCCACCGAGTTCCCTGACATGAACGTCCAACAGAGCGACACGGCGGCGCTGCTCTACTCTTCGGGGACCACGGGGCTTAGCAAGGGCGTGGTTCTCACTCACGCCAACTTCATCGCCTCCTCCTTGATGATCGGAATGGATGATGATTTGTACGGGGAGATGCACAGCGTCTACCTCTGCTTATTACCCATGTTTCATGTCTTTGGTTTGGCCGTCATTTCCTACTCCCAGCTTCAGAGAGCAAGTGCTGTCGTCTCGCTCAACAAGTTTGACCTCCAACTGCTTTTGAATACCATTCACAACTTTAGGGTCACCCATTTGTGGCTTGTGCCTCCCATTATTCTTGCTTTGGCCAAACACGCTTTCGTTAATAACTATGATCTTTCCTCCCTGAAGCATATTGGTTCTGGCGCTGCTCCCCTTGGGAAAGACTTGATGCTCGACTGCGCTAAACGTTTTCCTCATGCCACTGTTTCTCAGGGATATGGTATGACTGAAACTTGTGGGATTGTTTCTTTGGAGAATACGAGGATGGGGATTCGGCATAGTGGCTCTGCTGGGATGCTTGCTGCTGGAGTGGAAGCCCAAATAGTTAGTGTGGATACCCTGAAGCCTCTCCCTCCCGGACAGTTTGGGGAGATATGGGTAAGGGGTCCCAATATGATGCAAGGTTATCACAACAATCCACAAGCCACAAGATTGACTAAAGATAAAAAAGGATGGGTACATACAGGAGATCTTGGATATTTTGATGAGGATGGGCAAATTTTTGTTGTTGACCGTATCAAAGAACTGATCAAGTATAAAGGCTTTCAGGTTGCACCGGCAGAACTTGAAGGGCTCCTTGTTTCTCACCCTGAAATACTTGATGCTGTTGTCATTCCATATCCCGATGCTGAAGCTGGAGAGGTTCCAGTTGCTTATGTCGTTCGTTCCCCCAATAGTTCACTCACTGAGGAAGATGTTCAAAAGTTTATTGCTAATCAGGTAGCGTATTTCAAAAGATTACGGAGGGTGACATTCATCAATGCTGTTCCTAAGACAACGTCGGGAAAAATTCTCCGAAGAGAGCTTATTGAGAAAGTAAGATCCAAAATATGATATCGTGATATTATATATTTTTTCAAATTCTGAAGTGGAATGAAAGTCAGAGAGAACCCTCTTGAGTCTTAGGTACGATAAATTGCCAGTAGTCGAACAAGTATGTCTATGCATGGACCACTAGTCCACTACTTGAGGAAAATACATCAAATCATGTAAAAGAATTTATTTTCTAGTATAGGTGTTAAACTATTAAATTGTTAAACTATACATGCCAAAAAGAGAACTAGTATTATATATATATAAAAGCTAATTTCGTTTAGCA 2100 0.4648 MQRSGYGEDGIYRSLRPSIRLPKDPNLSLVSHLFNRVAHFPNKPALIDANSSETLTFSQLRSLTVHISHALLRLGLSKNDVVLFLAPNDIRYLVCFLAVTSLGAAVTTVNPSYTASEVAKQASDSNPKLLLTVPQLWDKLQHLNLPAVFLRSRSHSHSHSHSHSNVTTFDALLQLGADATEFPDMNVQQSDTAALLYSSGTTGLSKGVVLTHANFIASSLMIGMDDDLYGEMHSVYLCLLPMFHVFGLAVISYSQLQRASAVVSLNKFDLQLLLNTIHNFRVTHLWLVPPIILALAKHAFVNNYDLSSLKHIGSGAAPLGKDLMLDCAKRFPHATVSQGYGMTETCGIVSLENTRMGIRHSGSAGMLAAGVEAQIVSVDTLKPLPPGQFGEIWVRGPNMMQGYHNNPQATRLTKDKKGWVHTGDLGYFDEDGQIFVVDRIKELIKYKGFQVAPAELEGLLVSHPEILDAVVIPYPDAEAGEVPVAYVVRSPNSSLTEEDVQKFIANQVAYFKRLRRVTFINAVPKTTSGKILRRELIEKVRSKI 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03150 544 ProSitePatterns Putative AMP-binding domain signature. 195 206 IPR020845 -
Pste3g03150 544 FunFam Long-chain-fatty-acid--CoA ligase FadD 13 441 - -
Pste3g03150 544 Pfam AMP-binding enzyme 35 446 IPR000873 -
Pste3g03150 544 CDD 4CL 21 536 - -
Pste3g03150 544 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 8 539 - -
Pste3g03150 544 FunFam 4-coumarate--CoA ligase 2 442 543 - -
Pste3g03150 544 Gene3D - 442 543 IPR045851 -
Pste3g03150 544 Gene3D - 9 441 IPR042099 -
Pste3g03150 544 SUPERFAMILY Acetyl-CoA synthetase-like 23 542 - -
Pste3g03150 544 Pfam AMP-binding enzyme C-terminal domain 455 530 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03150 Pste-Chr3 24271071 24275278 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03150 1 544 Monolignol Biosynthesis Gene Families AT4G05160 64.890 0.0 761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03150 3 24271071 24275278 Pste3g03150 3 24271071 24275278 ECH