Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03120 AAAGAAAAATGGTGAAGATATCAGTTGGTGGATACGATGAGGGAGAAGGACCCAGCAACAGAATCCCAAAGCGACGCAGGGATGATGAAGAAGAAGAAGAAGACCAACAAACGCAACGAACCTTTGAAATTGTGGACCCTTCAATTGGAACTCAAGAGCATGAAGATCATGCTCCACCGAATGCTAACACAAATGGGGCTGCAACCAGTAGCAGGGATAGGTCAATTCCTATCTTCGTTTCTGACCCCGATGTCCTCGATTGTTGCATTTGCTATGAACCCTTGTGTGCCCCCGTCTTCCAGGTTAATTTCCCATCGTCCTGCCTTTGGGTAATGGGTAGTGACTTACTGGTGTGGGTGGAGATATTGGTGAAGAAGTTCAGTTGTGAGAATGGACATATTGCTTGCTCTAGTTGCTGTGTTAGAATCAGGAACAAGTGTCCCATGTGCTTAATGCCCATTGGGTATAATCGTTGCCGGGCTATTGAGAAAGTCCTGGACTCTATTAAAATGTCATGCCCGAATGCAAATTATGGCTGCAAAGAGACGTTTTGTTACAGCAAGAAAAACGAGCACGAGAAAGATTGCATCTATCTTCCATGCTCATGCCCACATGCTGGTTGTGATCTTATTGCATCATCCAAGGATAACCATGAACATCTAGGGAACATGGTTCGAATTAGTTGCATTGGCCACAGGTCCCTGGCAGAGTTCCAGTATGAAATTTTGGCTAGGTATCGAGGAAACACACTGATATTGCAGTCTTTTACAAAGATTGTTCAAGGTCAATATGCTGATGCTCCTTCAAATGGGTTCCTTTTGATTCCGTCTGGTTTTTTTGGTGCTCGACAACTGAAACTGGATATTCGCATAAATTACAAAAATAGGGTGAAGTCGGATATCAAAACCAAAAGCATCACAACAGAGACAAACAATCCCCATGGCAGTGATGATGACTCTGACTCTGCATCTCCATCATGCAAACGCGTCACACTTGGTGCGGGAAGCACAAAGCGTGCTCCTTGGGCGATGAGAGTCAACACAAGAGGCAAAAACAAGAGGAACAAGTTCACGTTGGTTGTGGCTATTTGCATGGATGAG 1100 0.4464 MVKISVGGYDEGEGPSNRIPKRRRDDEEEEEDQQTQRTFEIVDPSIGTQEHEDHAPPNANTNGAATSSRDRSIPIFVSDPDVLDCCICYEPLCAPVFQVNFPSSCLWVMGSDLLVWVEILVKKFSCENGHIACSSCCVRIRNKCPMCLMPIGYNRCRAIEKVLDSIKMSCPNANYGCKETFCYSKKNEHEKDCIYLPCSCPHAGCDLIASSKDNHEHLGNMVRISCIGHRSLAEFQYEILARYRGNTLILQSFTKIVQGQYADAPSNGFLLIPSGFFGARQLKLDIRINYKNRVKSDIKTKSITTETNNPHGSDDDSDSASPSCKRVTLGAGSTKRAPWAMRVNTRGKNKRNKFTLVVAICMDE 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03120 364 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 160 218 IPR013083 -
Pste3g03120 364 MobiDBLite consensus disorder prediction 15 30 - -
Pste3g03120 364 Pfam Seven in absentia protein family 155 222 IPR018121 GO:0005737|GO:0006511|GO:0007275
Pste3g03120 364 ProSiteProfiles Zinc finger SIAH-type profile. 165 223 IPR013010 GO:0008270
Pste3g03120 364 MobiDBLite consensus disorder prediction 301 328 - -
Pste3g03120 364 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 216 289 IPR044286 -
Pste3g03120 364 SUPERFAMILY TRAF domain-like 165 288 - -
Pste3g03120 364 MobiDBLite consensus disorder prediction 301 335 - -
Pste3g03120 364 MobiDBLite consensus disorder prediction 1 67 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03120 126 216 C3H Transcription Factor Family AT2G41980 40.000 1.03e-17 80.9