Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03094 GCCAAAACCCTATTATGAGAACTACAAATCCCCAATTTTTAAAACCCTCGCCGACCCTTTCATTTGTTCAGTTGAGAGAGGAGGAACATGCTGCTGACGCTGTAACTGTCAGAAACCACACTATAAGGTTTTATGGCGGTTTTGCTCATCTCCCTTCTTTGTTCCTCATTAATGGCATTGCTCTTTGTTTTTTTTTAATCTTTGAATTTCCTGTATATCCAACCGAATTTATTTTGAGAAAGGAATTTGAACTCTGGCACAAATTTGAATTCTACTTTAATTTTGCTTTTATGCAATTGTATCCTGTGAGCTGCTACATAAGAAAAGGATCAGAAGAAACCATAATTGTTGCATATTTTTGGAAGGGTTACCAGGAAGCAACAATGGATGTTGATTCGCAGCCAACTATGGATGAAACAATTTTGGTTGGTGATGATTTAATGATGGGTCCTCCATCACCTGTAGCTTGCAAATCAATGACATTGAACCATTTTGTCAAGATGAAATTGCTTTATATAAACAATGTGCCGAACGAAGGGTTAGATCGTTGTTATCACATATCAGATAGGGAGATACGGAATCGGCTTCAAGATAGTGAGTTCAAATTGGGTTCATCAATGCCTCTAGATGAAGCCAAGGGGAGGGCCTCTCAGCTCGAGGGAGAAGTGACATCATTGGAGAGGCGCCTAATTCTTGCTAGTGGAGTTGAGGGCATCGAAGGTTTTCGTCAAAGATGGAGCTTACATGGCCGGCTTACTGATTCCAAAATGAAGGTTGTCGCTGCCTATTTGCTCGCAGTGTTGGGAGGCAATTCATCCCCTTCTTCCAATGACATCAAAAATATCCTTGCCGCAGTTGGAGCTGAGGCTGAGGATACGTTGATTGATTTGCTCTTAACTGAAGTCAAGGGCAAAGACTTCAATGAGCTACTTGCCAGTGGACGAGAAAAGATGTCTGCAGTGTCTGCAGGCGGTGCTGCAGTTGCTGTTGCTGCTGCTCCGGCAGGAGGGGCTGGTGGTGCTGCACCAGCTGCCGAAGCAAAAGAAGAAAAGAAAGTAGAAGAGAAGGAGGAGTCTGATGATGATATGGGCTTCAGTTTATTCGACTAAAAGTTCTGAAAGTGTTTGTCTTACATTTTCTGTTCCATTTAGTATTTTAGCCCAATCACAAGTTTTTGTTACTTGATTTATATTGTTTTAGGTTTATGGATTTTGCACATTGGAGACAATGTAATGGTGTTATCAAACTCTCTGATATAATTTAGTAGTGTTTGAATTTAATTTGTTTGACCTTGGCTATCTGAATGAGTTATTTTTTATTTCCAAAAGAAGTTGCTTTTTATTTTGAAAAGACTACTTGTAAATGTGTTTGTTTGAATATTAAACATATAAAAATAATTAGAATC 1405 0.3936 MRTTNPQFLKPSPTLSFVQLREEEHAADAVTVRNHTIRFYGGFAHLPSLFLINGIALCFFLIFEFPVYPTEFILRKEFELWHKFEFYFNFAFMQLYPVSCYIRKGSEETIIVAYFWKGYQEATMDVDSQPTMDETILVGDDLMMGPPSPVACKSMTLNHFVKMKLLYINNVPNEGLDRCYHISDREIRNRLQDSEFKLGSSMPLDEAKGRASQLEGEVTSLERRLILASGVEGIEGFRQRWSLHGRLTDSKMKVVAAYLLAVLGGNSSPSSNDIKNILAAVGAEAEDTLIDLLLTEVKGKDFNELLASGREKMSAVSAGGAAVAVAAAPAGGAGGAAPAAEAKEEKKVEEKEESDDDMGFSLFD 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03094 364 PANTHER OS01G0191000 PROTEIN 124 155 - -
Pste3g03094 364 FunFam 60S acidic ribosomal protein P2 249 310 - -
Pste3g03094 364 Coils Coil 204 224 - -
Pste3g03094 364 Hamap 50S ribosomal protein L12 [rpl12]. 253 364 IPR027534 GO:0003735|GO:0005840|GO:0006414
Pste3g03094 364 MobiDBLite consensus disorder prediction 340 354 - -
Pste3g03094 364 Gene3D - 251 309 IPR038716 -
Pste3g03094 364 Pfam 60s Acidic ribosomal protein 269 363 - -
Pste3g03094 364 CDD Ribosomal_P2 252 313 IPR044076 GO:0002182|GO:0003735|GO:0022625
Pste3g03094 364 MobiDBLite consensus disorder prediction 331 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03094 Pste-Chr3 23750688 23761158 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03094 252 364 Cytoplasmic Ribosomal Protein Gene Family AT3G28500 55.556 1.25e-25 98.2