LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste3g03084	GCATGGTCATCCTAGATATAGGAGTTGCATTATGGTTGATTGCACAACTGTTCTATGATATTTTTTTCTAACTTCATTTTTCTATTATTGCAGATTCACGTTGTCTTCATGTTAATTGTGGTGGAAAGGATGTAGAGGTGAAGGAAAAAAATGATGAAAATATTCTCTATGTAGGAGATGGAGATGTTTTAGGTAGTGTTGCTGCTAAATATTTCATTGATTATGAAAATCACTGGGGTTTTAGCTGCACTGGGGACTTCATGGATGATGGCGATCAATTAAATTCACGTTATGTTAGGTCTTTGCGGTCTTCAAATTTGCCTGAATTATATGAAACTGCTCGTGTTACTCCAATTTCACTTACTTATTTTCACTATTGCTTGGAAAATGGGAAATATACTGTAAAACTCCACTTTGCAGAAATACAATTTACAAACGATAACACATACGGAAGTCTTGGGAAGCGCTTATTTGATATATATGTGCAGGAAACATTATTTTGGAAGGATTTTAATATTGAAGATCAGACGCATGCAGCTCAAAAACCACTTATACTGCCCATATATAATGTCAATGTAGCACACAATATTTTAGAGATCCGATTCTACTGGGCTGGCAAGGGGACTAGAAGGACTCCTTTTAGTGGAGTTTATGGTCCCCTTATATCAGCTTTCTCTATTGTTTCTGATTCTAAACCTTGTTCAGACCAAACAAGTACAAGGCATAAGATAATTGTTGGAGTTGGATTTGGACTTACAGCTTTATGCCTTGTCATTATCATAGTTGGAATCTTTCGGTGGAAGGGCTGCTTCAAAGGAATAATAAGGAAAACAAAAGGTACTGAAAGACAAGATTCTCCATCGGGTACATTTACGTTGAAACAAATTACAGATGCTACAGAGGATTTCAGTCCTGCTAACAAGATTGGAGAAGGTGGTTTTGGTCCTGTCTACAAGGGTCAGTTATCTGATGGTACATTGGTAGCAGTCAAACAACTCTCGTCAAAGTCACGACAGGGAAACCGTGAATTTTTGAATGAGATAGGCTTAATATCTTGTTTGCAACACCCTAATCTTGTGAAACTTCATGGATTTTGCATTGAAGGGGATCAATTAATATTAGTGTATGAGTACATGGAAAATAATAGTCTGGCTCGTGCTTTATTCAGTGAGTTTCTACCGAAGAAAGCAAAATATTATATTCGTCATTTGCCTTGTCATTTACTGTATGCTTTGAAATATAAGATGCTAAGCTCTAAAGATCAACTTAAACTAGATTGGCCAACAAGGCTTAGGATCTGTATTGGCATAGCTAAAGGTCTTGTATTTCTACACGAAGAATCAAGACTCAAGATTGTCCATCGAGACATCAAAGCTACTAATGTTTTACTAGATGGGAATTTAAACCCTAAAATATCTGACTTTGGACTAGCTAGGCTTGATGAAGAAGAGAAGACCCATATCACTACCCGAGCTGCCGGGACAATAGGGTATATGGCACCAGAATATGCATTATGGGGTCACCTGTCTTATAAGGTTGATGTTTACAGTTACGGAGTTGTGGTATTGGAAGTTGTTAGCGGGAAAAGTAATAAGAATTTCATGCCAAGTGATAATCGTGCTTGCCTTGTAGACGAGTCATGTCAACTAAAGCGAACTGAAAACTTAATAGAATTGGTTGATGAAAAGCTAGGATTAGAAATAAACCAAACTGAAGCAATAATTTTGATGGAAGTAGCTCTCCTATGCACCAGTGTATCGCCTTCACTTCGGCCTACAATGTCTGAGGTTGTAAACATGCTTGAAGGAAGAATGAGCATTTCAGATGCTATCTCGCAACCAGGTGATTTTAGTCAAGATAGGTTTAAAGCCTTCAGGGACATCCATCAACAAATGGAAAACCAGTGTGAGTACAAGCCTAGCAGACAATAAAAATAAGAGTCCTTACACTTAGCTCTCCCTAAAAATCTGGCAATGATTTGGTTGTTCGTTGTTGTTAGTTCATCATTGGACTGTTGACCATATTGCAACATTATGTATCCTTATAGCACAAGTTGCAGA	2060	0.3752	MDDGDQLNSRYVRSLRSSNLPELYETARVTPISLTYFHYCLENGKYTVKLHFAEIQFTNDNTYGSLGKRLFDIYVQETLFWKDFNIEDQTHAAQKPLILPIYNVNVAHNILEIRFYWAGKGTRRTPFSGVYGPLISAFSIVSDSKPCSDQTSTRHKIIVGVGFGLTALCLVIIIVGIFRWKGCFKGIIRKTKGTERQDSPSGTFTLKQITDATEDFSPANKIGEGGFGPVYKGQLSDGTLVAVKQLSSKSRQGNREFLNEIGLISCLQHPNLVKLHGFCIEGDQLILVYEYMENNSLARALFSEFLPKKAKYYIRHLPCHLLYALKYKMLSSKDQLKLDWPTRLRICIGIAKGLVFLHEESRLKIVHRDIKATNVLLDGNLNPKISDFGLARLDEEEKTHITTRAAGTIGYMAPEYALWGHLSYKVDVYSYGVVVLEVVSGKSNKNFMPSDNRACLVDESCQLKRTENLIELVDEKLGLEINQTEAIILMEVALLCTSVSPSLRPTMSEVVNMLEGRMSISDAISQPGDFSQDRFKAFRDIHQQMENQCEYKPSRQ	556

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste3g03084	556	CDD	STKc_IRAK	222	516	-	-
	Pste3g03084	556	Gene3D	Phosphorylase Kinase; domain 1	185	291	-	-
	Pste3g03084	556	Pfam	Malectin domain	11	138	IPR021720	-
	Pste3g03084	556	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	365	377	IPR008271	GO:0004672\|GO:0006468
	Pste3g03084	556	Gene3D	-	2	145	-	-
	Pste3g03084	556	FunFam	probable LRR receptor-like serine/threonine-protein kinase At1g53430	186	291	-	-
	Pste3g03084	556	ProSiteProfiles	Protein kinase domain profile.	216	518	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pste3g03084	556	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED	18	545	-	-
	Pste3g03084	556	FunFam	Putative LRR receptor-like serine/threonine-protein kinase	323	526	-	-
	Pste3g03084	556	SUPERFAMILY	Protein kinase-like (PK-like)	198	514	IPR011009	-
	Pste3g03084	556	SMART	serkin_6	216	514	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pste3g03084	556	Gene3D	Transferase(Phosphotransferase) domain 1	325	529	-	-
	Pste3g03084	556	Pfam	Protein tyrosine and serine/threonine kinase	220	514	IPR001245	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste3g03084	Pste-Chr3	23668931	23674194	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste3g03084	2	546	Receptor kinase-like Gene Family	AT1G07650	52.899	0.0	532

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Pste3g03084		PK_Tyr_Ser-Thr	1.4e-48	CL0016