Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pste3g03079 | CCCCCTTCATTTATCATCTGTTTCTTCGCTTTGTATAGCCAATGGATGAGAACTCAATAATAAATGGTACCCATGAGTTGGTTTTAGATGTAAACAAGGATGTGATCTCTAGAACAAGTGAAGCCTCACGCTCTTGTGTCAACGTTTCTTTCTTGCAGAAGTTGGTAGCAGAGGTGGTAGGCACGTATTTCTTGATATTTGCAGGGTGTGCTTCAGTGGTGGTGAACAAGAACAACGACAACGTTGTAACACTTCCTGGGATATCGATTGTTTGGGGACTGGTTGTCATGGTGCTGGTTTACTCTGTTGGTCACATTTCTGGTGCCCATTTCAATCCTGCTGTCACCATTGCTTTTGCCTCCACCAAAAGGTTTCCTGTCAAGCAGGTGCCAGTTTATGTAGTAGCTCAGGTTGTTGGATCCACACTGGCAAGTGGGACTCTCAGACTATTATTTAGTGGCAAGGATACCCAGTTTTCAGGAACGCTCCCAGCTGGGTCTGACGCGCAAGCTTTCGTGATTGAATTCTTAATCACATTTTTTCTTATGTTTGTCGTATCCGGGGTTGCCACTGATAACAGAGCGATCGGTGAGTTGGCCGGGATTGCCGTTGGGTCCACTGTGCTGTTGAATGTGTTGTTTGCAGGGCCAATCACAGGAGCATCAATGAACCCAGCAAGAAGCTTAGGGCCAGCCTTTGTACACAATGAATACAGAGGAATATGGATATATTTAGTGTCTCCAACTATAGGGGCTGTGAGCGGGGCATGGGTCTACAACTGTATCCGTTACACGGACAAGCCACTCCGTGAGATCACCAAGAGTGCCTCTTTCCTTAAAGCAGCTGGCCGTAGTGGTAGCTCTAGGTGATTTAACCACATTATTATATGTATTCAATTCTCATTGGAGAGGAGTAGTAACTTAACTTTGGACTAATACTTGTCTCCTAAATTTGTTATTTTCAACATCATATATCAGGAATCACTAGGATATCATTGCAAACACATATATACAAACAAATATTAGACTTTTCAC | 1034 | 0.4371 | MDENSIINGTHELVLDVNKDVISRTSEASRSCVNVSFLQKLVAEVVGTYFLIFAGCASVVVNKNNDNVVTLPGISIVWGLVVMVLVYSVGHISGAHFNPAVTIAFASTKRFPVKQVPVYVVAQVVGSTLASGTLRLLFSGKDTQFSGTLPAGSDAQAFVIEFLITFFLMFVVSGVATDNRAIGELAGIAVGSTVLLNVLFAGPITGASMNPARSLGPAFVHNEYRGIWIYLVSPTIGAVSGAWVYNCIRYTDKPLREITKSASFLKAAGRSGSSR | 275 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pste3g03079 | 275 | Gene3D | Glycerol uptake facilitator protein. | 7 | 260 | IPR023271 | - | |
Pste3g03079 | 275 | NCBIfam | MIP family channel protein | 43 | 245 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Pste3g03079 | 275 | PRINTS | Major intrinsic protein family signature | 115 | 134 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Pste3g03079 | 275 | PRINTS | Major intrinsic protein family signature | 160 | 178 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Pste3g03079 | 275 | PRINTS | Major intrinsic protein family signature | 78 | 102 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Pste3g03079 | 275 | PRINTS | Major intrinsic protein family signature | 228 | 248 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Pste3g03079 | 275 | PRINTS | Major intrinsic protein family signature | 39 | 58 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Pste3g03079 | 275 | PRINTS | Major intrinsic protein family signature | 191 | 213 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Pste3g03079 | 275 | SUPERFAMILY | Aquaporin-like | 33 | 259 | IPR023271 | - | |
Pste3g03079 | 275 | PANTHER | AQUAPORIN NIP2-1 | 29 | 265 | IPR034294 | - | |
Pste3g03079 | 275 | Pfam | Major intrinsic protein | 34 | 245 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Pste3g03079 | 275 | ProSitePatterns | MIP family signature. | 96 | 104 | IPR022357 | - | |
Pste3g03079 | 275 | CDD | MIP | 39 | 246 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pste3g03079 | Pste-Chr3 | 23605814 | 23607911 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pste3g03079 | 35 | 274 | Major Intrinsic Protein MIP | AT5G37810 | 62.397 | 1.01e-106 | 309 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pste3g03079 | 3 | 23605814 | 23607911 | Pste3g03079 | 3 | 23605814 | 23607911 | ECH | |
Pste3g03079 | 3 | 23605814 | 23607911 | Pste2g02226 | 2 | 22345373 | 22355124 | PCT |