Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03077 GTTTGCTAAGAGTTAGATACGTAGGTGAGTAGAGAGATAAGACTGTGCAGGCCACAGGGCGGTTTACAGAGCCAAGTTGCTTCTTTTTCTCTGTCCCAATGGCTGAGACCCACGAGGTTGTAGTAGATGTAACCAAGGACGGGTCTAAAACATGTGAAATCTCAGACTCCTTTGTCTCTGTTCCTTTCTTGCAGAAGTTGGTAGCTGAGGCGGTGGGCACATATTTCTTGATATTTATAGGGTGTGCTTCAGTGGTGGTGAACAAGAACTACCACAACCTTGTAACTCTTCCGGGGATAGCCATTGTTTGGGGGCTTGTTGTGACAGTGCTGGTTTACTCTGTTGGTCACATCTCTGGGGCCCATGTAAATCCTGCTGTCACCATTGCTTTTGCCTCCACTAGAAGGTTTCCCTGGAAGCAGGTACCGGCTTATGTAGCAGCTCAACTGGTGGGGGGCACACTTGCAAGTGGAACTTTGAGACTCTTATTTATGGGAAGACTTGACCAGTTTGCAGGAACACAACCATCTGGCTCTGACCTGCAAGCTTTTGTCTTTGAATTCATAATCACCTTCCTTCTTATGTTTGTCATATCCGGGGTTGCCACTGATAACAGAGCGATTGGTGAGTTGGCTGGGATTGCAATTGGGTCTACAATATTGATGAACGTGATGATTGGAGGGCCAATTACAGGAGCATCGATGAACCCAGTTAGAAGCTTAGGACCAGCTTTTGTACATAGCGAATACAGAGGAATATGGATATACATATTGGCACCTATTCTTGGGGCTGTGGCCGGAGCATGGGTCTACAACATCATTAGGTACACAGACAAGCCATTGCGTGAGATCACCAAGAGCGCTTCTTTCCTCAAAGCCCGGGGTGCCACCAAATAATTTAACCTAATGCAAATGTTCTGATGTGCCCAGAGACAATAACATTTGTCTTGTAATCGTCCTTGTTAGAAATAATAATTTTTAAAAAACAAATTATGCGTCAAATCGCTCCAAGAAACTACGCTCTCATATATGTTTCATTTCCTTCTTTCAAAAAT 1054 0.4459 MAETHEVVVDVTKDGSKTCEISDSFVSVPFLQKLVAEAVGTYFLIFIGCASVVVNKNYHNLVTLPGIAIVWGLVVTVLVYSVGHISGAHVNPAVTIAFASTRRFPWKQVPAYVAAQLVGGTLASGTLRLLFMGRLDQFAGTQPSGSDLQAFVFEFIITFLLMFVISGVATDNRAIGELAGIAIGSTILMNVMIGGPITGASMNPVRSLGPAFVHSEYRGIWIYILAPILGAVAGAWVYNIIRYTDKPLREITKSASFLKARGATK 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03077 265 ProSitePatterns MIP family signature. 89 97 IPR022357 -
Pste3g03077 265 Pfam Major intrinsic protein 26 238 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste3g03077 265 Gene3D Glycerol uptake facilitator protein. 2 253 IPR023271 -
Pste3g03077 265 SUPERFAMILY Aquaporin-like 26 252 IPR023271 -
Pste3g03077 265 NCBIfam MIP family channel protein 36 238 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste3g03077 265 PRINTS Major intrinsic protein family signature 32 51 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste3g03077 265 PRINTS Major intrinsic protein family signature 108 127 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste3g03077 265 PRINTS Major intrinsic protein family signature 184 206 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste3g03077 265 PRINTS Major intrinsic protein family signature 221 241 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste3g03077 265 PRINTS Major intrinsic protein family signature 71 95 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste3g03077 265 PRINTS Major intrinsic protein family signature 153 171 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste3g03077 265 CDD MIP 32 241 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste3g03077 265 PANTHER AQUAPORIN NIP2-1 19 258 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03077 Pste-Chr3 23584187 23589900 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03077 5 260 Major Intrinsic Protein MIP AT5G37810 58.015 4.97e-107 310