Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03047 GTCCCCCTAATAAACAAAGACCAAGCCAATCTGTCAACACGAAGCCCCGTTTTTAAAGGGCACTCTTCCTTCTCTCTCCTCCTTCCCCCTTTTCCTTTGTTTTCTTAATTAATTAACCTTGTATTCTGGCAATCTAGCTAACCCTTTCCATTTGCCACCATCGCCACCTTCTAGGTGGGATCCAGGCTCAGTATTACACACCACAGTTACCAGCTCCAAATCTCAAGAGATGGATAGTAAGTTCAGCAGCAACAATCGCAAATCGTATATCAGTAGTGAACAAGAACACATTGCAGACTCCCCTCCTTCTTCCACTGTGTTCAACATCGATGGTTTAGTCACCTCTCCCACTTCTTCCTCAAAGAGAAGGAGGGGAATAGAGAAAAGGGTGGTGCAAATCCCAATGAAGGAGACAGAAGGGTGTAGGCTAAAAGGAGAAAGTAACACGCCACCGTCGGATTCGTGGGCATGGAGAAAGTACGGGCAGAAACCCATCAAGGGTTCCCCTTATCCCAGAGGGTACTACAGGTGTAGCAGTTCCAAGGGGTGTCCGGCAAGGAAACAAGTGGAAAGGAGCTGCGTGGACCCCACAATGCTAGTTGTCACTTACTCCTCCGACCACAACCATCCCTGGCCAGCTTCTAGAAACCACGCCAGACCCACAAAGAAACACGAACCACAACCGGAACCAGAACCAGAACCGGAACCGGAACCCGAACCGGTGGAGGAGAAGTTCGCGGACCTGAGAGGCGACGAGTCAATGATAACAACAGCGGACGAATTAGGATGGCTGGGGGAGATGTCGTCGAGGGTGCTAGAAAGCCCTATAATGGCGGTGGGGTTCCATGCTGAGGTGGCAATGTTGCCCATGAGGGAAGAGGACGAGTCACTGTTCGCCGACCTCGGGGAGCTGCCGGAGTGCTCCGTCGTCTTCCGGCAGGGGCTTTTGGCTGAGCGACGGCGGTACACGTGTGGGACCACAAGTTGAGGCCATTAAAGTCAAAAGAGGTGCCTCTTTGACACGTTCTTGGTGCGGCACAAGAGGAACAAAAAAAAGATACCACAGCCTATATATGTATATTTATATTTTTTTTTCTAGATAATTTGAAAATTGATTTGGTTATTTACTTTGGTGAGAGAAGAGAAAATACAAGTAGAGTGGAATAAAAGGGGGTTGTGTGTGTCCGGAAGTGGTTGTAATTAGCGTAACATAAGCCGTCCATTTCAACAGCAACAGCAACAGCAACAGCAACAGC 1256 0.4896 MDSKFSSNNRKSYISSEQEHIADSPPSSTVFNIDGLVTSPTSSSKRRRGIEKRVVQIPMKETEGCRLKGESNTPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSCVDPTMLVVTYSSDHNHPWPASRNHARPTKKHEPQPEPEPEPEPEPEPVEEKFADLRGDESMITTADELGWLGEMSSRVLESPIMAVGFHAEVAMLPMREEDESLFADLGELPECSVVFRQGLLAERRRYTCGTTS 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03047 252 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 18 233 IPR044810 GO:0003700
Pste3g03047 252 Gene3D WRKY domain 64 137 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste3g03047 252 MobiDBLite consensus disorder prediction 128 175 - -
Pste3g03047 252 MobiDBLite consensus disorder prediction 1 86 - -
Pste3g03047 252 SMART WRKY_cls 75 135 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste3g03047 252 SUPERFAMILY WRKY DNA-binding domain 73 136 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste3g03047 252 Pfam WRKY DNA -binding domain 77 134 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste3g03047 252 MobiDBLite consensus disorder prediction 1 44 - -
Pste3g03047 252 ProSiteProfiles WRKY domain profile. 76 136 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste3g03047 252 MobiDBLite consensus disorder prediction 45 67 - -
Pste3g03047 252 FunFam WRKY transcription factor 65 60 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03047 Pste-Chr3 23271627 23273299 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03047 16 237 WRKY Transcription Factor Family AT1G29280 61.111 8.71e-74 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste3g03047 WRKY 5.3e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03047 3 23271627 23273299 Pste3g03047 3 23271627 23273299 ECH