Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03040 ATGACACTTCAACAATCAAATCAACAGGTGCAATTGCAAGAAGCAGAAGCAACATTTTCTGAACTGGGAAAACAAAACTCTATACTCTCACTCACCCTTGATGAGTTCCATTACAAGAATGGGAAGAGCTTAGGATCCATGAACATGGATGAATTCCTAGCCAGCATTTGGAACTCAGATGATAACCAACTTAACCCACTACTACCCACCCATGATGAAGATGCTAAGAATAAAAGTGTTGCAACAGAAGCCTCCATTTCCCAGCCAGGATCATTCTTTGTCCCTCCTCCAATTTGCAAGAAAACTGTGGATGAAGTATGGTCTCAGATCCACAAAGGCCAACCCCAGCACAATGAAGTTAATAATAGCCTTAGCAAGAATGAGCCACTCAAAAAACAGCAAACATTTGGAGAGATGACTTTGGAGGATTTCCTAGTAAAAGCTGGGGTAGTACAAGAATCATCATCACTATTCCAGTCTTCACCTGAGGGTCATATTATAAGTAATGGACTATTGAATGCGAGTTATGGATTGAAGCGTGTTATAGGGACAGGATCAAGTGTATCAAGTAATTTGCTAGAACCACAACAAATGTTGCCACAGAGTAGCTCCTTAGTTGTAAAGGATCACATTACAAGTGGTGTTGTGGAGAAAAGTCTAAGCTTAGGAGAATCAAGTGGGAAGGCTAATAGGAAGAGGATAATTGATGGTCCTCCTGAAGTGGTAGTAGAGAGAAGGCAGCGCAGAATGTTGAAGAATCGAGAATCAGCAGCACGTTCTCGAGCAAGAAGACAGGCGTACACGGTAGAGCTAGAAGCTGAGTTGAATCTACTAAAAGAAGAGAACGAAAAGCTCAAAGAAATTCTGATCAAAGCTGAACGCAAGAGAAAACAAGAGATTTTTGAGCGAAAGCACAGTACAATGGCTCAAAAGAGGACAGAGAAATTGAGGGCAATGGGGAGGCCTGTAAGCGCATCCTGGTGA 984 0.4207 MTLQQSNQQVQLQEAEATFSELGKQNSILSLTLDEFHYKNGKSLGSMNMDEFLASIWNSDDNQLNPLLPTHDEDAKNKSVATEASISQPGSFFVPPPICKKTVDEVWSQIHKGQPQHNEVNNSLSKNEPLKKQQTFGEMTLEDFLVKAGVVQESSSLFQSSPEGHIISNGLLNASYGLKRVIGTGSSVSSNLLEPQQMLPQSSSLVVKDHITSGVVEKSLSLGESSGKANRKRIIDGPPEVVVERRQRRMLKNRESAARSRARRQAYTVELEAELNLLKEENEKLKEILIKAERKRKQEIFERKHSTMAQKRTEKLRAMGRPVSASW 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03040 327 Gene3D - 243 299 - -
Pste3g03040 327 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 23 299 IPR043452 GO:0003700|GO:0045893
Pste3g03040 327 MobiDBLite consensus disorder prediction 301 327 - -
Pste3g03040 327 Coils Coil 264 298 - -
Pste3g03040 327 MobiDBLite consensus disorder prediction 301 318 - -
Pste3g03040 327 Pfam bZIP transcription factor 245 292 IPR004827 GO:0003700|GO:0006355
Pste3g03040 327 SUPERFAMILY Leucine zipper domain 245 288 IPR046347 GO:0003700|GO:0006355
Pste3g03040 327 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 243 287 IPR004827 GO:0003700|GO:0006355
Pste3g03040 327 SMART brlzneu 241 303 IPR004827 GO:0003700|GO:0006355
Pste3g03040 327 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 248 263 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03040 Pste-Chr3 23167937 23169336 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03040 6 327 bZIP Transcription Factor Family AT3G44460 46.866 4.77e-71 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pste3g03040 bZIP_1 3.9e-10 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03040 3 23167937 23169336 Pste3g03040 3 23167937 23169336 ECH