Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03039 ATGGCGAGCCACAGAATAGGAGACCTTGGTTTGTCTGAGTCAGGACCTTCAAGTCATCACATCTCTTACGAAGTGCTTAACGGGATTAACACTCCTGCATCAAGCTTAATCAATCAAGGATCTGCTTTTGATTTTGGGGAGCTGGAGGAAGCAATTGTTCTGCATGGAGTTAAGGGTAGAAATGATGAGGGCAAAGCATGTATGTTTCCGTTTCCATCACTTATGCTTTTTCTGACGTTAGATAAGCATAACCAACTCTTTCCAAAAGCAGAGAGAAAAGGAGGTGGTGGGGAGGTGAAAGATAAGAGCTTTATTCACAACCAGACCTGCAGCTACACTGGAAATGTTCCCTTCATGGCCAATAAGATTCCAGCAAACCCCAAGAGTACTAGTCTCCTACTTGGTGGTTCAAAGTCGGGAGGGGAAAGCACTGATTCAGGTCTTTCTAGCAAAACTGAGCCCCCCTTCGAGGCAGAATCTCCCATAAGTAAAAAGGCATCTTCTTCGGATCATCAGGCTTTTGATCAGCAGCATCTGCAGCATAGACAACAACTTCAACAGGAGATGGCAAGTGATGCACAAAGAACAGCCTCTTCACAGAATCAATCAGCAGCTAAGTCACCTCAAGAAAAGAGAAAGGGAGCTGGTTCCACATCAGAGAAGCCACTTGATGCAAAGACAATGCGACGTTTAGCCCAAAACAGAGAGGCTGCAAGGAAAAGCCGTCTCAGGAAAAAGGCTTATGTGCAACAACTAGAGTCAAGTAGATTAAAGCTTACCCAGCTAGAACAAGAACTTCAAAGAGCACGCTCACAGGGCATGTTCGTGGATTGTGGTGTTGTTGGAAGTAATGTAAGTTCTGCAGGAGCCGCAATGTTTGACATGGAATATGCAAGATGGTTAGAAGAAGACCATAGGCTGATGGGGGAGCTAAGGAACGGGTTGCAAGCACCGTTATCAGACAGTGATATGAGAGTGATGGTGGATGGATATCTTTCTCACTATGATGAGATTTTCAGTCTCAAGGGTGTTGCTGCTAAATCAGATGTGTTCCACCTTATCAATGGCATGTGGACTTCCCAAGCTGAACGTTGCTTCCTTTGGATTGGTGGTTTTAGACCCTCTGATCTCATCACGATGTTGATCCAACAGTTGGAGCCACTGGCAGAGCAACAGATAATGGGGATGTATGGTCTGAGGCATTCTTCACAGCAAGCAGAAGAAGCACTGTCTCAGGGGCTTGAGCAGTTGCAGCAGTCACTTGTGGACACAATAGCTGGAGGCTCAGTGGTCGATGGTGTGCAACAAATGGTCGTTGCCATGACCAAACTTGCCAATCTTGAAGGTTTTGTTCGCCAGGCTGATAATTTGAGGCAACAGACTCTTCATCAGTTATGTCGATTACTGACAGTTCGTCAAGCAGCACGATGCTTTGTTGTTATTGGAGAGTACTATGGACGTCTTCGTGCCCTTAGTTCTCTATGGGCATCAAGACCACGAGAGACCTTGATCAGCGACGAAAACTCATGCCAAACGACTACAGAAATGCAAATAGTCCAACATTCTCAGAATCACTTCTCAAATTTCTGAGAAATCATTATAACCCATTGGCCTGAAACAAGCTTGCTAGCCTTCTTGAGCTGCTTTACGACCAATCTCAGCGTCTTCTACAAGAAAAATATTTATTTATTTTTCTTTTCAATCTTCTACCTCTCATGTGTCTTTATGTTTTATTGTAAATGTAAATTTACTTTTATGTGCATGATGAGGAAGCTTCTACTTTCGCTAAAGAGAAATAGAAAAAAAAAAGTTTATGAGAAGGTGCATGTGGCATGAATGTAGATAAAGTATCCACACAATGAACTCTATCCCTAGTTGTCCAGTTGCTTCTTTT 1894 0.4361 MASHRIGDLGLSESGPSSHHISYEVLNGINTPASSLINQGSAFDFGELEEAIVLHGVKGRNDEGKACMFPFPSLMLFLTLDKHNQLFPKAERKGGGGEVKDKSFIHNQTCSYTGNVPFMANKIPANPKSTSLLLGGSKSGGESTDSGLSSKTEPPFEAESPISKKASSSDHQAFDQQHLQHRQQLQQEMASDAQRTASSQNQSAAKSPQEKRKGAGSTSEKPLDAKTMRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARSQGMFVDCGVVGSNVSSAGAAMFDMEYARWLEEDHRLMGELRNGLQAPLSDSDMRVMVDGYLSHYDEIFSLKGVAAKSDVFHLINGMWTSQAERCFLWIGGFRPSDLITMLIQQLEPLAEQQIMGMYGLRHSSQQAEEALSQGLEQLQQSLVDTIAGGSVVDGVQQMVVAMTKLANLEGFVRQADNLRQQTLHQLCRLLTVRQAARCFVVIGEYYGRLRALSSLWASRPRETLISDENSCQTTTEMQIVQHSQNHFSNF 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03039 529 Coils Coil 245 272 - -
Pste3g03039 529 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 224 268 IPR004827 GO:0003700|GO:0006355
Pste3g03039 529 MobiDBLite consensus disorder prediction 162 208 - -
Pste3g03039 529 PANTHER TRANSCRIPTION FACTOR TGA9 171 501 - -
Pste3g03039 529 SUPERFAMILY Leucine zipper domain 226 268 IPR046347 GO:0003700|GO:0006355
Pste3g03039 529 CDD bZIP_HBP1b-like 226 276 - -
Pste3g03039 529 ProSiteProfiles DOG1 domain profile. 290 498 IPR025422 GO:0006351|GO:0043565
Pste3g03039 529 MobiDBLite consensus disorder prediction 213 227 - -
Pste3g03039 529 Pfam bZIP transcription factor 225 266 IPR004827 GO:0003700|GO:0006355
Pste3g03039 529 SMART brlzneu 222 287 IPR004827 GO:0003700|GO:0006355
Pste3g03039 529 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 229 244 IPR004827 GO:0003700|GO:0006355
Pste3g03039 529 MobiDBLite consensus disorder prediction 129 227 - -
Pste3g03039 529 Pfam Seed dormancy control 308 382 IPR025422 GO:0006351|GO:0043565
Pste3g03039 529 MobiDBLite consensus disorder prediction 129 153 - -
Pste3g03039 529 FunFam BZIP family transcription factor 225 274 - -
Pste3g03039 529 Gene3D - 225 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03039 Pste-Chr3 23144835 23151313 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03039 197 529 bZIP Transcription Factor Family AT1G08320 72.156 1.93e-178 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pste3g03039 DOG1 3.8e-27 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03039 3 23144835 23151313 Pste3g03039 3 23144835 23151313 ECH
Pste3g03039 3 23144835 23151313 Pste1g02893 1 12405707 12413210 PCT